Sphingopyxis macrogoltabida EY-1: AN936_16300
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Entry
AN936_16300 CDS
T04104
Name
(GenBank) helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_16300
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AN936_16300
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AN936_16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALH81860
UniProt:
A0A0N9UZR1
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All DBs
Position
3461186..3464155
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AA seq
989 aa
AA seq
DB search
MADAKPDVFSIPVHRAFADALVAGLIARFADGALGLAEGLILLPSNRAKSAVQAAFVRAG
GAGLLMPRLAVIGDADLDESIGIALDAIDAAEPIPPAIDTLRRRLLLADLIERHTPAGEA
PIRGAAAFQLADGLARAIDQLHYEEVPVSALVDLDLGAFAGHWQASLARLRILVDHWPAV
LAATGHIDRAARRNRLLQRVTAAWRSAPPAPFVVAAGITTAAPAIARLLRTVADLERGMV
VLPGVDCGMAAEEWHALGPARPDPGDPARPIETHPQYHLKLLLDRMGVAREEVRAWDAGS
DFDGPEARAAFVSLLFAPADFTGQWQTAGDLSAATAGIAGAVFADDGQEAQGIALLMREA
VETPGRTAALVTPDRGLAERVAAALARWEINVDDSAGQPLSRTPPGALLLLLAELAASFD
PVALIALLGHPLVRKGEGRTTWLDQVRRLDLILREPGLAPDWDGVSARIAARAADPKARG
HGLAAELAPWWDELSAFGAMLAPFAAGQTLPATLLAALQGALEWLSGDAVWTGPAGRALA
ELFDQWTLARGDGPALVDPAEFPAMLGQLLTQASVRPPYGGHPRLFIWGLLEARLQRADL
MILGGLDEGRWPAATQPDPWLAPGIRRLLGLPAPERQQGMAAHDFAGALGAREIVVTRAA
RSGGDPVVASRFWLRLSALAGDLPEPAPGGVPLTRLATMLDVPSGDPQPVARPAPRPPAA
DRPRRISVTGVDRLARDPFAFYADRMLGLSALDPLSAAPDPRWRGTRVHKLFEDWVRGGA
TRDGFEAELAALGADPALDEIARAFWLPRIEPALRWAAAQVWNAEGREPLAVETSGEIVV
DGLTLHGKADRIDRTDGGGLAIVDYKSGGAPSAKAAFNKLDSQLGLLGLIAQRGGMKDIA
AAPVDALEYWSLRPDRRAGGAGKISNTYGSRSDLKSAEQTIDHASDALAELAALYLFGDA
PFVPGDVRGYGDYDQLMRRDEWFGRGEAD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgccaaacccgacgtcttctcgatcccggtccatcgggcctttgccgacgcg
cttgtcgccggattgatcgcgcgctttgccgatggcgcgctggggctcgcggaaggattg
atcctgctgccgagcaaccgcgccaagagcgcggtgcaggcggcgttcgtccgcgccggc
ggcgccgggctgctgatgccgcggctggcggtgatcggcgacgccgacctcgacgaatcg
atcgggattgcgctcgatgcgatcgacgccgccgagccgatccccccggcgatcgatacg
ctgcgccgccgcctgctcctcgccgatttgatcgagcggcatacgcccgcgggcgaagcg
ccgatccgcggtgcggcggcgttccagcttgccgacgggctggcgcgcgcgatcgaccag
ctccattatgaggaggtgccggtttcggcgctcgtcgacctcgacctcggcgcctttgcc
ggccactggcaggcgtcgctcgcccggctgcgcatcctcgtcgaccattggcccgcggtg
ctggcggcgaccggacatatcgaccgcgcggcgcgccgcaaccgcttgcttcaaagggtg
acggcggcgtggcgcagcgccccgcccgcgccctttgtggtcgcggcggggatcactacc
gccgcgccggcaatcgcgcggctgctgcgcaccgtcgccgatctggagcgcggcatggtc
gtgctgcccggcgtcgattgcgggatggcggccgaggaatggcacgcgctgggaccggcg
cggccggaccccggcgatccggcgcgcccgattgagacgcacccgcaatatcatctgaag
ctgctgctcgaccggatgggggtggcacgcgaggaggtccgggcgtgggacgcggggtcg
gatttcgacggacccgaagcgcgcgcggcgttcgtctccttgctcttcgctcccgccgat
ttcaccggccaatggcagacggcgggcgacctctcggcggcgaccgcggggatcgcgggc
gccgtcttcgccgacgacgggcaggaggcgcaggggatcgcgctgctgatgcgcgaggcg
gtcgagacgccggggcgcaccgcggcgctggtgacccccgaccgcgggctggccgaacgc
gtcgcggcggcgctcgcgcgctgggagataaacgtcgacgacagcgccgggcagccgttg
tcgcgcacgccaccgggggcgctgttgctgctgctcgccgaactcgcagcgagcttcgat
ccggtggcgctgatcgcgctgctcggccacccgctggtccgcaagggcgaagggcggacg
acgtggctcgatcaggtacggcggctcgatctgatcctgcgcgagcccgggctggcaccg
gattgggacggggtgtcggcgcggatcgcggcgcgcgccgccgacccgaaggcgcgcggc
cacgggctggcggcggagctggcgccgtggtgggacgaactgtcggcgttcggcgcgatg
ctggcgccgttcgcggcggggcagacgctgcccgccaccttgttggcggcgctgcagggc
gcgctcgaatggctgagcggcgacgcggtctggacggggccggcaggacgggcgctcgcc
gagctgttcgaccagtggacgctcgcgcgcggcgacggtcccgcgctggtcgatccggcc
gagtttcccgcgatgctggggcagcttctgacgcaggcgagcgtgcggccgccctacggg
gggcatccgcgcttgttcatctgggggctgctcgaggcgcggttgcagcgcgccgacttg
atgatcctcggcgggctcgacgaggggcgctggcccgccgcaacgcagcccgacccgtgg
ctcgcgcccggcatccgccgcctgctcggcctgcccgcgcccgaacggcagcaggggatg
gcggcgcacgacttcgccggcgcactcggcgcgcgcgagatcgtcgtgacgcgcgcggcg
cggagcggcggcgatccggtcgttgcgtcgcgcttctggctgcggctgtcggcgctggcc
ggcgacctgcccgaaccggcgccgggcggggtgccgctgacccggctggcgacgatgctc
gacgtgccgagcggcgatccgcagccggtcgctaggcccgcgccgcggccacccgccgcc
gaccggccgcgccggattagcgtcaccggagtcgataggctggcgcgcgatcccttcgct
ttctatgccgaccgcatgctcggcctgtcggcactcgacccgctgagcgccgcgcccgac
ccgcgctggcgcgggacgcgcgtccataaattgttcgaggattgggtgcgcggcggcgcg
acgcgcgacggcttcgaggcagaactcgccgcgctcggcgccgacccggcgctcgatgaa
atcgcgcgcgccttctggctgccgcgcatcgagcccgcgctgcgctgggccgccgcacag
gtctggaacgccgaaggacgcgagccgctggcggtagagacgtcgggcgagatcgtcgtc
gacggcctcaccctgcacggcaaggccgaccgtatcgaccggacggacggcggcggcctg
gcgatcgtcgattataaatcgggcggcgcgccgagcgcgaaagcggcgttcaacaagctc
gacagccagcttggcctgctcggcctgatcgcacagcgcggcgggatgaaggatattgcc
gcggcgccggtcgatgccctcgaatattggagcctgcgccccgaccgccgcgccggcggc
gccgggaaaatctcgaacacctatggttcgcggagcgacctcaagagcgccgaacagacg
atcgaccatgcgagcgacgcgctcgccgagctcgccgcgctctatctgttcggcgacgca
cccttcgtgccgggcgatgtccgcggctacggcgattacgaccagttgatgcgccgcgac
gaatggttcgggcggggcgaggcggactga
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