Sphingopyxis macrogoltabida EY-1: AN936_16715
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Entry
AN936_16715 CDS
T04104
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AN936_16715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_16715
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AN936_16715
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AN936_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_19
PIF1
Motif
Other DBs
NCBI-ProteinID:
ALH81941
UniProt:
A0A0N9UDZ2
LinkDB
All DBs
Position
3548928..3551096
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AA seq
722 aa
AA seq
DB search
MTRARVLLLTAALGPLDYRVPYGSEAPLGSVVVVPLGPRRMGGVVWEDESFGAPEPVGDN
RLRNLFEVVPVPPVSAPLRKLVEWTSDYYLAPPGSVLRMVLPGAAFADARRPIVEYRATG
ELPARMTPQRTVALEKIGTRQGIVRELAAMAEVSEAVIRGLVQTGALEAVSVSADQPYPQ
PDPAFAPPDLSDEQTAAAHQLREAVDAAKFETLLLDGVTGSGKTEVYMEAIAAAIDAGKQ
ALVLLPEIALTEPMLTRFAARFGCEPVAWHSGLRSTERRRAWHSIAAGEARIVVGARSAL
FLPYGNLGVIVVDEAHETSFKQEDGVHYHARDVAVMRGHFEGLPVVLASATPALESLAQV
EAGRYRHIVLPARFGGAAMPDLAAIDMRQDPPDRGSWLAPPLVEALADRLHKGEQSLLFL
NRRGFAPLTLCRTCGHRIQCPNCTAWMVEHRLVHRLACHHCGHVMPPPRLCPECEDEDSL
VACGPGVERVADEVALRFPEARVAIVTSDTLWSPAKAAEFVDNVEGGLIDIIIGTQLVTK
GYHFPNLTLVGVVDADLGLDGGDLRASERTFQQIAQVAGRAGRGVKPGAVLIQTRVPEAP
VMAALVANDRDGFYTAEAAARKFAGAPPYGRFAALVISSEDIEVARGQAQRLGQKAPVAE
GLAVYGPAPAPLAMLRGRHRFRLLLHAPRSFDLQGTIREWVNSVDWPSKARLAIDIDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgcccgcgtcctccttttgaccgccgccctcggcccgctcgattatcgcgtg
ccttatggcagcgaagcgccgctcggcagcgtcgtcgtcgtgccgctggggccgcggcgg
atgggcggcgtggtgtgggaggatgaaagcttcggcgcgcccgaacccgtcggcgacaat
cgcctgcgcaacctgttcgaagtggtgccggtgccgccggtttccgcgccgctgcgcaag
ctcgtcgaatggacgagcgactattatctcgcgccgccggggtcggtgctgcgcatggtg
ctgcccggtgcggcctttgccgatgcccggcgcccgatcgtcgaatatcgcgccaccggc
gaactgccggcgcggatgacgccacaacgcaccgtcgcgctcgaaaagatcggcacgcgg
caggggatcgtgcgcgaactcgcggcgatggccgaggtcagcgaggcggtgatccgcggg
ctcgtccagacgggcgcgctcgaagcggtgagcgtgtcggccgaccagccctatccgcag
cccgatcctgcgttcgcgccgcccgatctgtcggacgagcaaaccgccgccgcgcatcag
cttcgcgaggcggtcgatgccgcgaagttcgagacgttgctgctcgacggcgtcaccgga
tcgggcaagaccgaagtctatatggaggcgatcgccgccgcgatcgacgcgggcaagcag
gcgctcgtcctgctccccgaaatcgcactcaccgaaccgatgctgacccgcttcgccgcg
cgcttcggctgcgaaccggtcgcttggcattcgggcctccgctcgaccgagcgccgccgc
gcctggcacagcatcgcggcgggcgaggcgaggatcgtcgtcggcgcgcgatcggccttg
tttctgccctatggcaatctcggcgtcatcgtcgtcgacgaagcgcacgagacgagcttc
aagcaggaggacggcgtccattatcacgcgcgcgacgtcgcggtgatgcgcgggcatttc
gagggactgccggtggtgctcgcgagcgcgaccccggcgctcgaaagcctcgcgcaggtc
gaggcggggcgctatcgccatatcgtcctccccgcgcgcttcggcggcgcggcgatgccc
gaccttgccgcgatcgacatgcggcaggatccgcccgaccggggaagctggctcgccccg
ccgctcgtcgaggcgctcgccgaccggcttcacaagggcgagcagagcctgctgtttctc
aaccgccgcggcttcgcgccgctgacgctctgccgcacctgcggccaccgtattcagtgc
ccgaactgcaccgcgtggatggtcgagcaccggctcgtccaccgccttgcctgccatcat
tgcggccatgtcatgccgccgccgcggctctgccccgagtgcgaggacgaagacagcctc
gtcgcgtgcggcccgggggtcgaacgcgtcgccgacgaggtcgccctgcgctttcccgaa
gcgcgcgtcgcgattgtcaccagcgacaccttatggtcgcccgcgaaggccgccgagttc
gtcgacaatgtcgagggcggcctcatcgacatcattatcgggacgcagctcgtcaccaag
ggctatcatttccccaacctgacgctcgtcggcgtggtcgatgccgacctcgggctcgac
ggcggcgacctgcgcgcctccgaacgcacctttcaacaaatcgcgcaggtcgcaggacgc
gccgggcgcggggtgaagccgggcgcggtgctgatccagacgcgcgtgcccgaggcgccg
gtgatggcggcgctcgtcgcgaacgaccgcgacggtttctataccgccgaagcggcggcg
cggaagttcgccggggcgccgccctatggccgcttcgccgcgctggtcatttcgtcggag
gatatcgaggtcgcgcgcgggcaggcgcagcggctgggccagaaagcaccggttgccgaa
ggcctcgccgtctacggccccgcgcccgcaccactcgcgatgctgcgcggccgccaccgc
ttccgcctgctcctccacgcgccgcgcagcttcgatctgcagggaacgatccgcgagtgg
gtgaacagcgttgactggccgtcgaaggcgcgtctggcgatcgatatcgatccttatagt
ttcgtctga
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