Sphingopyxis macrogoltabida EY-1: AN936_17150
Help
Entry
AN936_17150 CDS
T04104
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AN936_17150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smag03021
]
AN936_17150
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_17150
Enzymes [BR:
smag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AN936_17150
Transcription machinery [BR:
smag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AN936_17150
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AN936_17150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
HHH_XRCC3_RpoA
TmoB
Surface_Ag_2
Motif
Other DBs
NCBI-ProteinID:
ALH82018
UniProt:
A0A0N9UPX6
LinkDB
All DBs
Position
complement(3644850..3645908)
Genome browser
AA seq
352 aa
AA seq
DB search
MTVNIRNWQELKKPSNLEIKAGSDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPATVKAGDI
MVSGDIKVMNPNHVICHLDDGATLNMELVADTGKGYVPATANRPADAPIGLIPVDSLYSP
VRQVAYKVDNARIGQELDYDKLNLTVETDGTVTPEDAVAYAARILQDQLQVFVHFEEAMN
DSGMIGMAAPSTTADESDVNQLNRFLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEA
EMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaatatccggaactggcaggaattgaagaagcccagcaacctggaaatcaag
gctggcagcgacggcaagcgcaaggcgaccttcgtcgccgagccgctcgagcgcggcttc
gggctgacgctcggcaacgcgctgcgccgcgtgctgctctcgtcgctccagggtgcggcg
atcacgtcgatcaagatcgagaacgtgctgcacgaattctcgagcctggccggcgtgcgt
gaagacgttaccgacatcgtcctcaacgtgaagcagatcgcgctcaagatggaaggcgaa
ggcccgaagcggctccagctttcggccaccggtcctgcgaccgtcaaggccggcgacatc
atggtgtcgggcgacatcaaggtgatgaacccgaatcatgtcatctgccatctggacgat
ggcgcgacgctgaacatggaactcgtcgccgacaccggcaagggctatgtccccgcgacc
gccaaccgcccggccgacgcgccgatcggcctgatcccggtcgattcgctctactcgccg
gtgcgtcaggtcgcctacaaggtcgacaatgcccgcatcggtcaggagctcgactatgac
aagctgaacctgaccgtcgaaaccgacggcacggtgaccccggaagacgccgtcgcttac
gccgcgcgcatccttcaggaccagctccaggtcttcgtccacttcgaagaagcgatgaac
gacagcggcatgatcgggatggccgcgccgtcgaccaccgccgacgaatcggacgtcaac
cagctcaaccgcttcctgctcaagaaggtcgacgagctcgaactgtcggtccgcagtgcc
aactgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagaccgaagcg
gaaatgctccgcaccccgaacttcggccgcaagtccctgaacgaaatcaaggaagtgctg
tcgtcgatgggtctgcgcctcggcatggacatccccggatggccgcccgagaacatcgag
gaaatggccaagaagctcgaacaggaacttctcggctga
DBGET
integrated database retrieval system
