Sphingopyxis macrogoltabida EY-1: AN936_19610
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Entry
AN936_19610 CDS
T04104
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag02020
Two-component system
smag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AN936_19610
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AN936_19610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smag03021
]
AN936_19610
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smag02035
]
AN936_19610
Transcription machinery [BR:
smag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AN936_19610
Bacterial motility proteins [BR:
smag02035
]
Flagellar system
Flagellar assembly proteins
Stator
AN936_19610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ALH82485
UniProt:
A0A0N9UAS2
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All DBs
Position
4181191..4181961
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AA seq
256 aa
AA seq
DB search
MRIEPAGQFAGATGPREYAAAGGTLRPRGYPDSVERLVDEYAPLVRKIAWQVFSRVSRTS
ELDDLIQMGLIALIEASRHYEERGFAFATYASTRIRGAMIDQLRREADVGRSAMVANKRL
KTVRATLEQHLMRAPTAAEMAEAFEMSAEEYFALERSATQGRSTSLDELTESGSFLIADD
RPGAETLYEEEDVLDALRQCIDRLSEREQMVLQLYFFEELNLQEIGLTLDVSAARICQIK
RDAMAKVNAMMVEMTE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgagcccgcggggcagttcgccggcgccaccggtccgagggaatatgccgcc
gccggcgggacgctgcgcccgcgcggctatcccgacagcgtcgaacggctggtcgacgaa
tatgcgccgctggtgcgcaagatcgcctggcaggtgttttcgcgcgtgtcgcggacgagc
gaactcgacgacctcatccagatgggactgatcgcgctcatcgaggcgagtcgccactat
gaagagcgcggctttgcctttgccacctatgcctcgacccgcattcgcggcgcgatgatc
gaccagctccgccgcgaagccgacgtcggccgctcggcgatggtggcgaacaagcggctg
aagacggtccgggcgacgctcgaacagcatctgatgcgcgcgccgacggccgccgagatg
gccgaggcgttcgaaatgtcagccgaagaatatttcgcgctcgaacgcagcgcaacgcag
ggccgctcgacctcgctcgacgagttgaccgagagcggcagcttcctgatcgccgatgac
cggccgggcgccgaaacattatatgaggaagaggatgtgctggatgcgctgcgccagtgc
atcgaccggctgtccgagcgcgagcagatggtgctccagctctatttcttcgaggaactg
aatttgcaggagatcggcctgaccctcgacgtcagcgctgcccgcatctgccagatcaag
cgcgacgcaatggcgaaggtcaatgcgatgatggtggaaatgaccgaatag
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