Sphingopyxis macrogoltabida EY-1: AN936_20290
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Entry
AN936_20290 CDS
T04104
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_20290
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_20290
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AN936_20290
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Topoisomerases
AN936_20290
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AN936_20290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
NQRA_2nd
Motif
Other DBs
NCBI-ProteinID:
ALH82609
UniProt:
A0A0N9V4A5
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All DBs
Position
complement(4331952..4334528)
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AA seq
858 aa
AA seq
DB search
MTDTPENIAPTAPANQPNTNAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
SDNAIDEALAGHCDLVLITLNSDGSVSVEDNGRGIPTGIHAEEGISAAEVIMTQLHAGGK
FENTSDDNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGEEHWMRFEHGDSVAPLKVNGP
APAGKKGTRVTFMASTETFKNVTEFDFEKLEHRYRELAFLNSGVRIKLVDARHAEHQSHD
LFYEGGIAAFVKYLDRNKNALLPDPIAISSERDGIGIDVALEWNDSYYENVLCFTNNIPQ
RDGGTHLAAFRAALTRTLNGYGDKSGILKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQ
TKDKLVSSEVRQPLESLMADRMTEWLEENPAYAKAVIQKVIDAAAAREAAKKARELTRRK
GAMDIASLPGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRHVQAILPLKGKILNVER
ARFDRIISSKEVGTLIQALGTGIRDEFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYR
QMPEIIEGGHLYIAQPPLYKVAKGRSEVYLKDDTALENYLVDGGIDALMLETTGGARSGA
DLRDLIEHGRRLRALMRYVPRGHNYELVEALALNGALDPELDSGGRTAAGVRAAEWLNAA
ERALTGGAEAKWTIVAVDGGYTLEKRWRGVSDHHAIDAAFLASQEARRLHKLASEQAETY
AHPGRLVKGSSAAAIAADAAALAAAETAEDDAEASDSDLPAATAGKVTPITRPSELLDAI
FAHSRKGLAISRYKGLGEMNAEQLWETTLDPSNRSLLRVEAEQADVAHEIFERLMGDEVE
PRRDFIQTNALSVANLDV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacccctgaaaatatcgccccgaccgcgcccgccaaccagcccaataccaat
gcctatggcgccgattcgatcaaggttctgaagggcctcgacgcggtgcggaaacgtccg
ggcatgtatatcggcgacaccgacgacgggtcgggtctgcatcacatggtgttcgaggtt
tcggacaatgcgatcgacgaagcgctcgcgggtcactgcgaccttgtcctgatcacgctc
aacagcgacggatcggtcagcgtcgaggataacggccgcggcatccccaccggcatccat
gccgaggaaggcatttcggcggccgaggtcatcatgacccagctccatgcgggcgggaag
ttcgagaacaccagcgacgacaatgcctataaggtgtcgggcggtctccacggcgtcggc
gtcagcgtcgtcaacgcgctcagcgaatggctcgaactcaccatctggcgcgatggcgaa
gagcattggatgcgtttcgaacatggcgattcggtcgcgccgctcaaggtcaacggcccc
gcccccgccggcaagaagggcacgcgcgtgaccttcatggcgtcgaccgagactttcaag
aatgtcaccgaattcgatttcgaaaagctcgagcatcgctatcgcgagctcgctttcctg
aactcgggcgtccgcatcaagctcgtcgacgcgcgccatgccgaacatcaaagccacgac
cttttctacgaaggcgggatcgcggcattcgtcaaatatctcgaccgcaacaagaatgcg
ctgctccccgatccgatcgcgatcagcagcgaacgcgacggtatcggcatcgacgtcgcg
ctcgagtggaacgacagctattatgaaaatgtcctctgcttcacgaacaacatcccgcaa
cgcgacggcggcacgcacctcgccgccttccgcgccgcgctgacgcgcaccttgaacggc
tatggcgacaagtcgggcatcctcaagaaggagaaggtgtcgctgactggcgaggatatg
cgcgaaggtctgactgcgattgtgtcggtcaaactgcccgatccgaagttcagctcgcag
accaaggacaagctggtcagcagcgaggtccgccagccgctcgaaagcctgatggccgac
cggatgaccgaatggctcgaggaaaaccccgcctatgccaaggcggtgatccagaaggtg
atcgacgccgccgcggcgcgcgaagctgcgaaaaaagcgcgcgagttgacgcggcgcaag
ggcgcgatggatatcgcgagcctgcccggcaagctcgccgactgtcaggaacgcgatccc
agcaagtgcgaactcttcctcgtcgagggtgactcggcaggcggctcggccaagcagggc
cgcgaccgccatgtgcaggcgatcctgcccttgaagggcaagattctgaacgtcgagcgc
gcccgcttcgaccgcatcatctcgtcgaaggaagtcgggacgctgatccaggcgctcggc
accggcattcgcgacgagttcaacctcgaaaaattgcgctatcacaagatcgtgatcatg
accgacgccgacgtcgacggcgcgcatatccgcaccttgctgcttaccttcttctaccgc
cagatgcccgagatcatcgagggcggccacctctacatcgcccagccgccgctctacaag
gtcgcgaaggggcgcagcgaggtgtacctcaaggacgataccgcgctcgaaaattacctc
gtcgatggcggtatcgacgcgctgatgctcgaaaccacgggcggcgcaagatcgggtgcc
gacctgcgcgacctgatcgagcatggccgccgcctgcgcgcgctgatgcgctatgttccg
cgcggccataattacgagctcgtcgaagccttggcgctgaacggcgcgctcgatcccgaa
ctcgacagcggcggacggaccgcggcgggcgtgcgcgccgccgaatggctcaacgccgct
gaacgcgcgctcaccggaggcgccgaggcgaaatggacgatcgtcgcggttgacggaggt
tatacgctcgaaaagcgctggcgcggggtcagcgatcatcacgcgatcgacgccgccttc
ctcgcgagccaggaggcccgccgcctgcacaagctcgcgagcgaacaagccgagacctac
gcccatcccggccgtttggtgaagggcagcagcgccgcggccatcgccgccgacgcggcc
gcgctggccgccgccgagaccgccgaagacgatgccgaagcgagcgacagcgatctgccc
gccgccaccgccggcaaggtcacgccaatcacgcgtccgtccgaactgctcgacgcgatc
ttcgcgcacagccgcaagggcctcgcgatcagccgctacaaggggctgggcgagatgaat
gcggagcagctttgggaaaccacgctcgatccgtcgaaccgctcgctgctccgcgtcgag
gctgaacaggccgacgtcgcgcacgaaatcttcgagcggctgatgggcgacgaggtcgaa
ccgcggcgcgatttcatccagaccaatgcgctcagcgtcgccaatctcgacgtctga
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