Sphingopyxis macrogoltabida EY-1: AN936_20545
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Entry
AN936_20545 CDS
T04104
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03030
DNA replication
smag03430
Mismatch repair
smag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN936_20545
03430 Mismatch repair
AN936_20545
03440 Homologous recombination
AN936_20545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_20545
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_20545
Enzymes [BR:
smag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN936_20545
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN936_20545
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN936_20545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
DUF3131
Motif
Other DBs
NCBI-ProteinID:
ALH82659
UniProt:
A0A0N7GT66
LinkDB
All DBs
Position
4380801..4381499
Genome browser
AA seq
232 aa
AA seq
DB search
MREIIFDTETTGFDPKTGDRLVEIGCIELVDRRETGQSFHAYFNPERDMPAAAEAVHGLS
IQFLSDKPLFAARVDELLEFLGDAPLIAHNAVFDFGFVNAELARAGRPALDMARMCCTVQ
MARKLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAHLYIEMTGGRQIGLGLATSP
AAVPVAATAAAAPRIGARPFREPRPHVASAAELARHAEFVAGLNQPLWLDTV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagattatcttcgataccgaaaccacggggttcgatcccaaaaccggggacagg
ctggtcgaaatcgggtgcatcgaactggtcgaccgccgtgaaacgggccagagctttcac
gcctatttcaaccccgaacgcgacatgcccgccgccgccgaagcggtgcacggcctgtcg
atccagttcctgtccgacaagccgctgtttgcggcgcgggtcgacgaattgctcgaattt
ctcggcgacgcgccgctgatcgcgcacaacgccgtgttcgacttcggcttcgtcaacgcc
gaactcgcgcgcgccggccggccggcgctcgacatggcgcgcatgtgctgcaccgtccag
atggcgcgcaagctgcatccgggagcgaaacacagcctcgatgcgctctgtacgcgctac
ggcatcgatcgcagccatcgcgtcaagcacggcgccttgctcgacgccgaactgctcgcg
catctttacatcgaaatgaccggcgggcggcagatcgggctcggattggccacctcgcct
gccgctgtcccggtcgctgcgactgccgccgccgccccgcgcatcggcgcgcgtccgttt
cgcgaaccccgcccccatgtcgcatcggccgccgaactcgcgcgccatgccgaatttgtc
gcagggctgaaccagccgctgtggctcgatacggtgtga
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