Sphingopyxis macrogoltabida EY-1: AN936_21110
Help
Entry
AN936_21110 CDS
T04104
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03030
DNA replication
smag03430
Mismatch repair
smag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN936_21110
03430 Mismatch repair
AN936_21110
03440 Homologous recombination
AN936_21110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_21110
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_21110
Enzymes [BR:
smag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN936_21110
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN936_21110
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN936_21110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
ALH82771
LinkDB
All DBs
Position
4482470..4483501
Genome browser
AA seq
343 aa
AA seq
DB search
MKTVKPAELERLSRLDPAVRFTLLTGPDEATMAAVAGHLIGLAGKDAERLDLTGTQLAQD
PSLLAAEAASMSLFSPARVIRLEISGSGDDSVAAVEALLAADNAINPVVATGASVTAKSK
LVKLVEGSDSAVAAICYQPDRRALVGIAMGAAEEQGLRIANSEAQLLVDLVSGDQALMRR
EIEKIALYLDAGRDRQRQVTAADIAALGAATHEEDVSECINVALGGKVRELPVMLATAAA
VGVAEIRIIRALAIRAMELARLRAEVDAGAHPATVVAAKSSGVFWKERDAVTAQLHIWDS
VRVARLMSRLLDCERALKASGTAGAVLFRKLMTDIAHQAARAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtcaaacccgccgaactcgaacgcctctcgcgcctcgatcccgcggtgcgc
ttcacgctgctcaccggccctgacgaagcaacgatggcggccgtcgccgggcatctgatt
ggcctcgccggcaaggatgccgaacggctcgacctgacgggcacccagctcgcgcaggat
ccgtcgctgctcgccgccgaagccgcgtcgatgtcgctgttttcccccgcgcgggtgatc
cggctcgaaatctccggcagcggcgacgacagcgtcgcggcggtcgaggctttgctcgcc
gccgacaatgcgattaacccggtggtcgcgaccggcgcgtcggtcaccgccaagtcgaaa
ctggtcaagctggtcgaggggtcggacagcgcggtcgccgccatctgttaccagcccgac
cggcgcgcgctggtcggcatcgcgatgggtgccgccgaggaacaggggctgcgcatcgcc
aattcggaggcgcaattgctcgtcgacctcgtgtcgggcgatcaggcgctgatgcggcgc
gagatcgagaagatcgcgctctatctcgacgcggggcgcgaccggcagcggcaggtgacc
gccgccgacatcgccgcgctgggcgccgcgacgcacgaagaagatgtcagcgagtgcatc
aatgtcgcgctcggcggcaaggtgcgcgaactgcccgtcatgctggcgaccgcggcggcg
gtcggcgtcgccgaaatccgcatcatccgcgcgctggcgatccgcgcgatggagctcgcc
cggctgagggcagaggtcgatgccggcgcgcatcccgcgaccgtcgtggccgcgaagagc
agcggcgtcttctggaaagaacgcgacgcggtgacggcgcagctccacatctgggattcg
gtgcgcgtcgcgcggttgatgagccggctgctcgattgcgagcgggcgctgaaagcgtcg
gggaccgcgggcgcggtgctgttccgcaagctgatgaccgacatcgcgcaccaggcggcg
cgggcgcgctga
DBGET
integrated database retrieval system
