Shewanella maritima: EXU30_00695
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Entry
EXU30_00695 CDS
T06365
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smai
Shewanella maritima
Pathway
smai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXU30_00695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smai03019
]
EXU30_00695
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_00695
Enzymes [BR:
smai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXU30_00695
Messenger RNA biogenesis [BR:
smai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXU30_00695
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXU30_00695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
HEM4
AAA_22
Pex14_N
TNFR_c6
Motif
Other DBs
NCBI-ProteinID:
QBF81378
UniProt:
A0A411PCY5
LinkDB
All DBs
Position
complement(129942..131915)
Genome browser
AA seq
657 aa
AA seq
DB search
MSNNTFNQPDNLHLESQLQQWFGFSQFNLGQKQVIQHLLAGQSSLAIFPTGSGKSLCYQF
SALCLPNVTLVVSPLLALMKDQLAFLASKGVSAASIDSTLTFEQTKDVMQGVREGQIKIL
MVSVERFKNERFRRFLSSIAISMLVVDEAHCISEWGHNFRPDYLKLPQIRTEFNIAQVLL
LTATAKRQVKLDMAAKFGINEQCIVQTGFERSNLHLQVMATPEHHKRQQLLASITPHQQQ
GNAGIVYVTLQQSAEDLASFLTSNGIEAQAYHAGLDTSQREQIQDDFMSGAVNIIVATIA
FGMGVDKSDIRFVIHYDLPKSIENYSQEIGRAGRDGKDSQCITLANKDGINTIENFVYGD
TPQKDDIAELIKIIHHNVDSGVWEMQESAISSQTNIRLLTLKTLLVQLEIRGVLQASYAY
FADFKYKFELSESEILAKFNAERQQFLKQIFEFTAFKKIWGQLDFNALQQTFGHERSRVV
AALEYLSEKNMISLETKKITQVYKVNQQLLAENNLVDELTAYFADTEHKEIARIHALVAF
FETDQCISYRLAQYFDDHNAAVQCGRCSVCLGNAQVLPETQQSAVLNDQIIKGYIDEFCQ
LAQDKGFSAPDAYTKTKFLIGMVMPRYSRAKVRQLTGFATCQHIRFEHVLAQVKKLA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataacactttcaatcaaccagataaccttcatcttgagtcgcagctgcagcag
tggtttggcttcagccagtttaatcttggtcaaaagcaggttatccaacacttgctcgca
gggcaatcttcactggcaatattcccaacaggttcaggcaaatcactttgttatcaattc
agtgctttatgtttacctaatgtcaccttggtagtttcgccgctgcttgcgctgatgaaa
gatcaactggcgtttttagcgagcaaaggggttagtgccgcgagtattgactcaacctta
acgtttgagcagaccaaagatgtcatgcaaggggttagagaagggcaaattaaaattttg
atggtgtcagtagagcgatttaaaaatgaacgatttaggcgttttcttagctctattgcg
atttcgatgttagtggttgatgaagcgcactgtatttctgagtggggacataattttaga
cctgactatctaaagctgccgcaaatccgtacagagtttaatattgctcaggttttattg
ttaacagcaacggccaaaagacaagttaaacttgatatggctgccaaatttggcataaat
gaacagtgcatagtgcaaactggatttgagcgcagcaatctgcacctgcaagtcatggca
acacctgaacatcacaagcgtcagcaattactggcttcaattacacctcatcagcaacaa
ggtaatgccggtattgtgtacgtgacgttgcagcaaagcgctgaagatcttgcgagtttt
ttaacgagtaatggcattgaggctcaggcataccacgcaggcctggatacgtcgcagcgt
gaacaaattcaagatgattttatgtcaggtgctgtgaatataattgttgcaaccatcgca
tttggtatgggtgtagacaaaagtgatattcgttttgttattcattatgacctgcctaag
tccattgaaaattatagtcaggaaatcggcagagcagggcgtgatggtaaagattcacag
tgtattacgcttgctaacaaagatggcattaataccattgagaattttgtttatggtgat
acacctcagaaagatgatatagctgaactaatcaaaataattcatcataatgttgattct
ggcgtttgggaaatgcaagaaagcgctatttctagccaaaccaatatccgacttttaaca
ttaaaaaccttgttggttcagttggaaattcgcggcgtgcttcaggccagttacgcctat
ttcgccgattttaagtataagtttgagctaagcgaatctgagatcttggctaaatttaat
gccgaacgccagcaattcttaaaacaaatatttgagttcacagcatttaagaaaatctgg
ggacagttagactttaatgcactgcaacaaacctttggtcacgagcgctctcgcgtggta
gccgcgctagagtatttatctgaaaaaaatatgattagcctagagactaaaaaaatcacc
caggtctataaggtgaatcagcagttactcgccgaaaacaatttagtcgatgagttaact
gcgtattttgctgataccgagcacaaagaaatcgctcgcatccatgcgttggtcgcgttt
ttcgaaactgaccaatgtatcagttatcgcctagcacagtattttgatgatcataacgca
gcggtacaatgcgggcgttgtagcgtgtgtctgggtaatgctcaagtgttgcctgaaact
cagcaatcagctgtgttgaacgatcaaatcatcaagggttatatcgacgaattttgccag
ttagcccaggataaaggctttagtgcgcccgatgcttataccaaaactaaattcctgatt
ggcatggtgatgccaagatattcgagggctaaagtacgccagctaacagggtttgccaca
tgtcagcatattcgttttgaacatgtcttggctcaagtgaaaaaactggcttaa
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