Shewanella maritima: EXU30_01645
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Entry
EXU30_01645 CDS
T06365
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
smai
Shewanella maritima
Pathway
smai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXU30_01645 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_01645 (uvrB)
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXU30_01645 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXU30_01645 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA
DUF87
Kinesin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBF81548
UniProt:
A0A411PDH0
LinkDB
All DBs
Position
complement(364091..366109)
Genome browser
AA seq
672 aa
AA seq
DB search
MSESIFSLASKFEPAGDQPTAIKQLVDGLESGIAHQTLLGVTGSGKTYTVANVIKEMGRP
TIIMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNDHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYMKMLLHLRQGDFMGQRDILKRLSEM
QYTRNDIDLQRGTYRVRGEVIDIFPADSDRDAIRVELFDDEIERLSEFDPLTGQITKRIA
RTTVYPKTHYVTPREKILAATEEIKEELRVRRQELLDNNKLIEAQRITERVQYDVEMMVE
LGYCSGIENYSRYLSGRPAGDGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFENLMPQTIFVSATPSNYELEKSDDEIAEQVVRPTGLL
DPELEVRPVAIQVDDLLSEANKRIALNERVLVTTLTKRMAEDLTEYLDEHGVRVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADTVTKSMDKAMKETERRRAKQHQFNLDNGIVPKGVVKSITDVMDI
GDARPTGKAKRGKGLAKVAEPEVNYDSTVDINKQIQQLEKQMLEHAKNLEFEQAAALRDE
VAMLRDKMILES
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaatcgattttttcacttgcttccaaatttgagcctgcaggcgatcagccaacc
gcgataaagcagctggttgatggtttagagtcaggcattgcgcaccaaactctgcttggg
gtaactggctctggtaaaacctatacggttgctaatgttattaaagaaatggggcgtccg
accattattatggctcccaataaaaccctggcagctcagctatatggagagatgaaagag
ttcttccctaataatgctgttgagtattttgtttcttattatgactactatcaaccagaa
gcctacgtaccagcatcaaacacttttattgagaaagatgcatcagttaacgatcacatt
gagcaaatgcgcctgtcggcaacgaaagccctactggagcgtaaagatgtcgtgttgatt
gcgtctgtttcagctatctatggtcttggcgatcctgactcttacatgaagatgttattg
cacttgcgtcagggcgactttatggggcagcgtgatattttaaagcgcctgagtgaaatg
cagtacacccgcaacgatattgacctgcagcgtggtacctaccgtgtacgcggagaggtg
attgatatattcccagctgattcagatagagacgcgattcgcgttgagctttttgatgat
gaaattgaaagattaagcgagtttgaccctttaactgggcaaattaccaagcgcatagct
cgcaccactgtttacccgaaaacgcactatgtgactccgcgcgaaaaaattcttgccgca
accgaagagattaaagaagagcttcgcgtacgccgtcaggaactactggataataacaag
cttattgaagcccaacgcattactgagcgggttcaatacgacgttgaaatgatggtggag
cttggttactgctcaggtattgagaactactcacgctatctatctgggcgaccagcgggc
gacggaccgccaaccttacttgattacttgccagctgatggtttgctgattatcgatgag
tctcatgtcactgtgccacaaattggtgccatgtataaaggtgaccgcagccgtaaaacc
acactagtcgagtatggttttaggctgccatccgcgcttgataaccgcccgctcaagttt
gaagagttcgaaaacttaatgccgcaaacgattttcgtatcggcaacaccaagcaactat
gaacttgaaaaaagtgatgatgaaattgctgagcaggtagtgcgcccaacaggcttgctt
gacccagagcttgaggtgcgcccggtggcaattcaggtcgacgacttgctgtctgaggcc
aacaagcgtatcgcgttaaatgaaagggtgctggtcaccacattaacgaaacgcatggca
gaggatttaactgagtaccttgatgagcacggcgtgcgagtgcgctaccttcactccgat
attgataccgtggaaagggtggagatcattcgcgatctgcgccttggtgagtttgacgtg
ctggtcggtattaacttgctgcgtgaggggttagacatgccagaagtgtcgctggtgtgt
attctcgatgctgacaaagaaggctttttacgctcagagcgctcgcttattcagaccatc
ggccgcgccgctcgtaacgtcaatggtaaggtgatcttgtacgctgatactgtcacaaaa
tccatggacaaggcgatgaaagaaaccgagcgtcgccgtgctaagcagcatcagtttaac
cttgataatggcattgtgcctaaaggtgtggtgaagagtattaccgatgtaatggacatt
ggtgatgctagaccaacaggtaaagcgaaacgtggcaaaggcctcgccaaagtggcagag
cctgaggttaactacgacagcaccgttgatatcaataagcagatccaacaactcgaaaaa
caaatgctggaacacgctaaaaacctcgagtttgagcaagcagcagcactacgtgatgaa
gtggcaatgcttagagataagatgattttggaaagttag
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