Shewanella maritima: EXU30_02020
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Entry
EXU30_02020 CDS
T06365
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_02020 (sbcD)
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXU30_02020 (sbcD)
Archaeal homologous recombinant proteins
EXU30_02020 (sbcD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
UBL_AVO1
Motif
Other DBs
NCBI-ProteinID:
QBF81603
UniProt:
A0A411PDH3
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Position
complement(453053..454396)
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AA seq
447 aa
AA seq
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MRILHTSDWHLGQYFYGKSRAAEHQAFMDWLLEQIKLHQVDLLIVAGDIFDTTTPPSYAR
ALYNQFIVDLQQTECQLLILGGNHDSVATLGESQGLLAYLNTHVIPGGFDSPEQHVLSFD
KDGEPMALVCALPFLRPRELVTSQAGDSRESKQQKLASAIADYYQQSFDHAQKINAELAT
PVPIIATGHLTTVGVTSSESVRDIYIGTLDAFNANLFPAADYIALGHIHRSQKVAKTEHI
RYSGSPIPLSFDEIGFDERFAQSESSSGKSVLLVSFEQDKLTEVTELDVPLFQPMTVLKG
KLADIEASIDKLVQSAAEHNKAQNTWLSIEVEQQDLLSDLQDRIAQLIADKPLEVLQLKR
ARKPRSQTISDTHNETLSEIKVEDVFERRLALEVFETEDELASRERLRVKFKELVEQVQQ
ETAAPKQDAQEPLQPESQAQSKAEAKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattttacacacttcagactggcatcttggtcagtatttttacggcaaaagccgc
gcagctgagcatcaagcttttatggactggctacttgagcaaataaagctgcatcaagtg
gacttgttgattgttgccggtgacattttcgacaccaccacgccgccaagttatgcccgc
gcactttacaatcagtttattgtcgacttgcaacaaaccgagtgtcagttattgatattg
ggtggtaatcatgactctgtggcaacccttggtgaatcgcaaggcttactagcctatcta
aacacccatgttattcctggcggctttgacagcccagagcaacatgtactgagctttgac
aaagatggcgagccgatggcattggtttgtgcattgccatttttgcggccacgtgaactg
gtgaccagtcaagcaggtgattctcgcgagtctaaacagcaaaagcttgctagcgcgatt
gccgactattaccaacaaagctttgatcatgcacaaaagattaatgctgagttagccacg
cctgtgccgattattgccactgggcatttaaccacagtgggcgtcactagctcagagtcg
gtgcgtgacatttacatcggcacgctcgatgcctttaacgccaacttgtttcctgctgcc
gattatattgcccttgggcatatccaccgcagtcaaaaggtcgccaaaactgagcatatt
cgctatagcggctctcccattccgcttagtttcgatgagataggctttgatgaacgattt
gcacagagcgagtctagctcgggcaaatcggtattactggtgagctttgagcaagataag
ctcaccgaggtgactgagcttgatgtgccattgttccaacctatgacagtgctcaagggc
aagctagctgatattgaagctagcatcgacaagttagtccagagtgcagcggagcataat
aaggcgcaaaatacctggctaagtattgaagtcgagcagcaagatttactcagcgattta
caagatcgcatcgcgcaactcattgccgataagccactagaagtattacagcttaaacgt
gctcgcaaaccacgtagtcaaaccattagcgacacccataatgagaccttaagtgaaatt
aaagttgaagatgtatttgagcgtcgcttagcactagaagtgtttgaaactgaagatgag
ctagcgagccgtgagcgcctgcgcgttaagttcaaggagttagttgaacaagtgcagcaa
gaaactgcagcgcccaagcaagatgctcaagagccgttgcaaccagaatcacaagcgcaa
tcaaaagcggaggcaaaagcatga
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