Shewanella maritima: EXU30_02180
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Entry
EXU30_02180 CDS
T06365
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
smai
Shewanella maritima
Pathway
smai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EXU30_02180 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_02180 (recB)
Enzymes [BR:
smai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EXU30_02180 (recB)
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXU30_02180 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
ResIII
AAA_30
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QBF84758
UniProt:
A0A411PMQ3
LinkDB
All DBs
Position
499063..502839
Genome browser
AA seq
1258 aa
AA seq
DB search
MPQSAIAVKPLKPLALSFSGTNLIEASAGTGKTYTISGLYLRLLLGHGGQAPLTCEQILV
VTFTNAATEELRDRIRKRIQLAFKRFIGVATDDEFIEALYQQTPEAERELAIKRFDLALK
TLDEAAIYTIHGFCQRVLADMAFESSLLFESEFTLDDSEYLHHAVRDFWREVCYQLPPSM
AALISSKVATPDELAKKLRPLLGATEAVQSFTPQEFTKLSQSLVESIARLKKRFALEQDT
TLELLTALPLNGARFGKKAEGYPKLTQMFEQLATWAQFGQGLPPMKVLEHLSLSTLKLNK
GGEIPTVQQAPLLDHIERVYEAINQVMPAFFVKAQQGIKHRFIEQKRQRNLMTPDDLLLT
LADAIKSQGSVLSQAIAKRFPMAMIDEFQDTDPLQFDIFSAVYHQNQSQDAVADSLISAS
PALGLLMIGDPKQAIYAFRGADIYTYISARKQTEAHFNLDTNYRSGKDLVSSVNALFKLH
HDPFISDAIPFDEVATPPQAAQKQLINSNESCSLGIRLLAEDPEAGLNKTNARQLLSEDA
ANEIAKLLNDAANNQCLIKQKPLQAKDIAVLVRDRNEAAVIKESLSSRGIGAVFLSRDSV
FNTQEASDIALILQALANPKDERRIRAALACELIGYSAEQIHQFNQNENQRQTLLDQFMQ
WHDIWLSNGIMPALLRMASDTKLVQRLLSQRLTSTVQSSLNIDDDEVGNINASGERRLTD
FRHLAELLQQKATELDGSSALINWFEQQLIDANGQDEQQLRLESEQNLVQIVTIHKSKGL
EYPICFVPFVSLVRGNNRTPEPLLYHQDDQLIWDLDGSKDGWEIQKREALAEDLRLLYVA
LTRPVYRCYLGIANQSRKLKAGISSQLFQSAIGYLLGITDKNCLIDDIKTQLSPLAALDF
INIIDIEPQEVCSLAQSQEQEAELAAKVLTRPQGISWRVGSYSGLVKDRGLVTDAHKVEQ
HTPAAIPGADDEDFNQETNIELNPQTKELVPAFIHGAAEPFEENTLLVDEVQYNRFTFER
GANAGSFMHLVMEEFDFTKADNELEGALLESMKRYGFDEQIWLAPLTQWYQEILATPLQI
PASSSELTLSKLGAKQVMVEMEFYLPLEALSADKLNQILIRYGYPAGFSFDTLSGMLKGF
IDLTFEYQGKYFIADYKSNHLGDDYSHYVGDNLTAAIYDHHYHLQYILYTVALHRFLQLR
HPNYDYQSHMGGSLYLFLRGMNPAHPNSGVYYDMPPQALIEELDQLFKSGQSVGAQAC
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgccacaatcagcaatagccgttaaaccgcttaaacctttagcgctaagcttttccggt
actaacttgattgaggccagcgccggtacaggtaaaacctataccatttcaggcttgtat
ctcaggttgctacttggccatggcggccaagcaccgctcacctgtgagcaaattttggtg
gtaacctttaccaatgccgccaccgaagagttgcgcgatcgtattcgcaaacgtatccaa
ctggcatttaagcgctttattggcgtggctacagatgatgaatttatcgaagcgctctac
caacaaacacctgaagcagagcgcgagcttgccattaaacgctttgatttagcgctgaaa
acacttgatgaagccgccatttataccattcacggtttttgtcagcgggtgctggctgat
atggcgtttgagtcctctttgctatttgagtctgaatttacccttgatgacagtgaatac
ttacatcatgcggtgcgcgatttttggcgcgaggtatgttatcaactgccacctagcatg
gcagcgcttattagcagcaaggttgccacgccagatgagctagccaaaaaactaaggccg
ctattaggcgcgaccgaggcggtgcaatcattcacgccacaagaatttactaagctcagc
caatcattagttgaaagcattgctcgtttaaaaaaacgctttgcgctggagcaagacacc
actcttgagctattaacggcgctaccgctcaatggcgcgcgttttggtaaaaaagccgaa
ggctaccctaaactcacgcaaatgttcgagcaactggcaacctgggcgcaatttggccaa
ggcctaccaccgatgaaggtgcttgagcatttatctttatcaacactcaagcttaataaa
ggcggcgaaatacccacggtgcaacaagcaccattgctcgatcatattgagcgcgtttat
gaagccatcaatcaggttatgccagcgttttttgtcaaagcgcaacaaggcattaaacac
aggtttattgagcaaaagcgtcaacgtaacttgatgacacctgatgatttactgctcacc
cttgccgatgcgattaaatcgcaaggcagcgtactcagtcaggccatcgctaaacgcttc
cctatggcgatgattgatgagtttcaagataccgacccgctacagtttgatatttttagt
gcggtttatcatcaaaaccagtcacaagatgccgtagcagacagcttaattagtgcaagc
cccgcgcttggcttgttgatgattggcgatcccaaacaggctatttacgcctttcgcggc
gctgacatttacacctatatcagtgcgcgcaagcaaaccgaagcccattttaacctcgat
accaactaccgctctggtaaagacttagtcagctcggtaaatgccttattcaagctgcac
cacgacccatttattagtgacgcgatcccatttgatgaagtcgcaacgccgccacaagct
gcgcagaaacaattaatcaatagtaacgagtcttgctcattaggtattcgcctgcttgct
gaagaccctgaagctggccttaacaaaaccaatgcaaggcaattactcagtgaagatgcc
gccaatgaaattgctaagctgctaaatgacgcggctaataaccagtgcttaatcaagcaa
aagccgctacaagctaaagatattgcggtactggtgcgcgacagaaatgaagccgcagtt
atcaaagagtcgttatcttcacgcggcattggcgcagtatttctcagccgcgacagtgtg
ttcaacacccaggaagccagcgacatagccctgattttgcaagcactggctaaccctaaa
gatgagcgccgtattcgtgcggcgctcgcttgcgagttaattggttatagcgccgagcaa
atccatcagttcaatcaaaatgaaaatcagcgtcaaaccctactcgaccagtttatgcag
tggcatgatatctggctaagcaacggcattatgccagcgctactgcgtatggcgagcgac
actaaactggtgcaacgactgctgagccagaggctaacaagcacagttcaatccagcttg
aatattgatgacgatgaagttggcaatatcaacgccagcggtgagcgccgcctcaccgac
tttagacatctggccgagctgctacagcaaaaagccaccgagcttgatggcagtagcgca
ttgatcaattggtttgaacagcagctcatcgatgcaaatggtcaagacgagcaacagcta
agattggagagcgagcaaaatctggtgcaaattgtcaccattcataaatcgaaaggtttg
gagtacccaatttgttttgtgccttttgtcagtttggtgcgcggcaataatcgcacgcca
gagcctctgctttatcatcaagacgaccaactcatatgggatttggacggcagcaaagat
ggctgggaaatacaaaaacgcgaagcgctcgctgaagacttacgtttgctgtacgtcgcc
cttacccgccctgtgtatcgctgctatcttggcatcgcaaatcagtcgcgtaaattaaaa
gcaggaataagctcacagttgttccaaagcgccattggctacctgcttggcattaccgac
aaaaattgcctgattgacgacatcaaaactcaattgagcccattagcagcgctcgatttt
atcaacataattgatattgagccgcaagaggtgtgttcactagcgcaatctcaggagcaa
gaagccgagcttgctgccaaggtattaactagaccacaagggatcagttggcgcgtaggt
agctactctggtttagtaaaagataggggtctagtaacagacgctcataaggttgagcag
cacactcctgccgcaatcccgggcgcagatgatgaagactttaaccaagaaactaacatc
gagcttaacccacaaactaaagagctcgtgcctgcatttatccacggagcagcagagccc
tttgaagaaaatacactgctagtagacgaggtgcaatacaaccgctttacctttgaacgc
ggtgctaatgccggtagctttatgcatctggtgatggaagagtttgacttcaccaaagca
gataacgagcttgaaggcgcgttacttgagtcaatgaagcgctatggttttgatgaacag
atctggcttgcaccattaactcagtggtatcaagagatcttggcaacgccattgcagatc
ccagctagctcgtcagagttaaccttatcaaagctgggcgctaagcaggttatggtggag
atggagttttatcttccccttgaagccctgagtgcagataagcttaatcaaatactgatc
cgctacggttacccagcaggatttagcttcgataccctatcgggcatgctcaaaggtttt
atcgacttaacctttgaataccaaggtaaatactttattgctgactataagtctaatcac
cttggcgatgattacagccattatgtaggcgataacttaaccgcagcgatatatgatcac
cactatcacctgcaatacatactgtacacggtcgccctgcaccgctttttgcagttgcgt
catccaaattatgactaccaatcccacatgggcggcagcttgtatttattcttacgcggc
atgaatccggctcaccctaatagcggcgtgtattacgacatgccgccccaagcattaatc
gaagagttagatcaattgttcaagtcaggtcaatcagtaggagcgcaagcatgttag
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