Shewanella maritima: EXU30_05170
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Entry
EXU30_05170 CDS
T06365
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smai03016
]
EXU30_05170 (truD)
Enzymes [BR:
smai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EXU30_05170 (truD)
Transfer RNA biogenesis [BR:
smai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EXU30_05170 (truD)
Prokaryotic type
EXU30_05170 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QBF82157
UniProt:
A0A411PEY8
LinkDB
All DBs
Position
complement(1225529..1226632)
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AA seq
367 aa
AA seq
DB search
MTQLHYLHGKPQVTADLRTENADFIVQEILPFSPTGEGEHHLVQIRKSGFNTNQVVDMLA
KFAKVHPKEVTYAGQKDKNAVTEQWFGIRIPGKDTPDWQAFSQQNITVLQSSRHSKKLRI
GALLGNKFTLTLRNVSDTAAFEARLEQVLKTGVPNYFGEQRFGHNGKNLTLGRNMLNGGR
KIKDRKKRSMFLSAVRSNIFNLVVSHRLQTSGLQGLDGDCVMLSGSKSYFVADSWDDTIE
QRLITKDIQLSAPLWGRGAALAQGDAAQIEQAALTGFEQDLKGLEQAGLEQERRPLMLEP
QGLKWQLADNTMVLEFILPAGSYATSVLRELVDYQDVQQIAWQKMVAEQSEQQASAQAET
GQGEARD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattacattacttacatggtaaacctcaggttaccgctgatttgcgcactgaa
aatgcagactttatagtgcaagaaatcctgccgttctcaccaacaggagagggcgaacat
catttagtgcagatccgtaagtccggctttaacaccaatcaagtggtggatatgttagcc
aagtttgccaaggttcacccaaaagaggtgacctacgcagggcaaaaagataaaaacgcg
gtaacagagcaatggtttggtatacgcattcccggtaaagacacgccagactggcaagcc
ttcagtcaacaaaatatcactgtgctgcaaagcagtcgtcacagtaaaaaactacgtatt
ggcgctttgctaggtaataagtttaccctgactttacgcaacgtttcagatacagctgct
ttcgaggctcgccttgagcaagttttaaaaactggagtgcctaattactttggcgagcag
cgatttggtcacaatggtaagaacctcacgctaggtcgcaatatgcttaatggcggccgt
aagattaaagaccgcaaaaaacgtagcatgttcttatctgccgtgcgctctaacatcttt
aatttggtagtttctcacaggttgcaaacgagtggcttacaaggacttgatggcgattgt
gtcatgctctctggcagcaaaagctactttgtggctgacagttgggatgacactatagag
cagcgactaatcaccaaagatattcagctgtctgctcctttatgggggcgaggcgctgct
ttggcacaaggtgatgccgcgcaaatcgagcaagccgcgctaactggctttgagcaagac
cttaaaggattagagcaggcaggacttgagcaagagcgtcgcccgttaatgcttgagcca
caaggtctgaagtggcaactagctgacaatacaatggtattagagtttattttgcctgcc
ggcagttatgcgacatctgtgcttagagagcttgtcgattatcaagacgtgcagcaaatc
gcctggcaaaagatggtagcagagcaaagtgaacaacaggcaagcgcacaagctgagact
ggccaaggtgaagcacgtgattaa
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