Shewanella maritima: EXU30_05430
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Entry
EXU30_05430 CDS
T06365
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smai
Shewanella maritima
Pathway
smai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXU30_05430 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smai03019
]
EXU30_05430 (pnp)
03016 Transfer RNA biogenesis [BR:
smai03016
]
EXU30_05430 (pnp)
Enzymes [BR:
smai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EXU30_05430 (pnp)
Messenger RNA biogenesis [BR:
smai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXU30_05430 (pnp)
Transfer RNA biogenesis [BR:
smai03016
]
Prokaryotic type
tRNA degradation factors
EXU30_05430 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
OB_PDCD11
KH-I_KHDC4-BBP
S1_2
aRib
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QBF82204
UniProt:
A0A411PFG0
LinkDB
All DBs
Position
complement(1292259..1294358)
Genome browser
AA seq
699 aa
AA seq
DB search
MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKEADAGRDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPDGFKNEVQVIITVVSVD
PQIEPDIVAMIGTSAALAVSGIPFNGPLGAARVGYINGEYVLNPSVDQVVESQLDLVVAG
TQSAVLMVESEAEALPEEVMLGAVTYGHDQQQVVVNAISEFKAEAGKPTWDWSAPEQDQD
LVAKIKDLAEAGLTEAYQIQVKQDRYAQVGVVKAQAKAKLLEENPEADTREIDGLLGSLE
KNVVRSRIISGKPRIDGREPDMIRALNVLAGVLPRTHGSSLFTRGETQALVTCTLGTERD
AQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPSAEEF
PYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDI
LGDEDHLGDMDFKVAGTRDGITALQMDIKIEGITKEIMDIALQQAYGARVHILNVMDQAI
SGAREEISDHAPRITTIKINPEKIRDVIGKGGATIRALTEETGTTIELDDDGTVKIASAD
GAATKEAIRRIEEITAEVEVGRIYKGKVIRIVDFGAFVNILPGKDGLVHISQISEERVAN
VSDHLEMNQEVAVKVMEVDRQGRVRLSIKEAQAKEEAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgtaaagagttttgagtatggtcaacatactgtcaccctagaaacaggt
gtcatcgcacgtcaagcagacgctgcagttctagcgagtatgggagatacaactgtatta
gttactgttgtaggtaagaaagaggctgatgccggccgtgattttttcccgctgacagtt
aactatcaagagaagacatacgctgcaggtaaaatccctggtggtttcttcaagcgtgaa
ggtcgtccttctgaagatgaaaccctaatcgcacgtctaatcgaccgtccaattcgtcct
ttattccctgacggttttaaaaacgaagttcaggtaattatcactgttgtttcggttgat
cctcaaatcgagccagacattgttgctatgatcggtacctcagcagcattagctgtttca
ggtattccattcaatggtccactaggtgctgcgcgcgttggttacatcaacggcgaatac
gtactaaacccaagcgttgatcaagtagttgaaagccaacttgacctagtggtagcgggt
acccaaagcgcggtacttatggttgagtctgaagctgaagcacttcctgaagaagtgatg
ctaggtgcggtaacttatggtcatgaccaacaacaagttgttgttaacgcaatcagcgaa
tttaaggctgaagcgggcaagcctacttgggactggagtgcaccagagcaagatcaagat
ctagtagctaaaatcaaagacctagcagaagctggtttgactgaagcttaccaaattcaa
gttaagcaggaccgttacgcacaagttggcgtggttaaagcgcaagcaaaagctaaatta
cttgaagagaatccagaagctgacacgcgtgaaatcgacggtctactaggtagcctagag
aagaacgtagtacgtagccgtattatcagcggcaagccacgtatcgatggtcgtgagcct
gacatgatccgtgcgctaaacgtattagcaggcgtacttccacgtactcacggtagctca
ctatttacccgtggtgaaactcaggcgttagtgacttgtactcttggtacagaacgtgat
gctcaaaaaattgatagcatcatgggcgagcgtactaaccgcttcatgcttcattacaac
ttccctccatactctgttggtgaaacaggtatggttggttcgcctaagcgtcgtgaaatt
ggtcacggtaagttggcatggcgtggtatcaatgcggtaatgccttctgctgaagaattc
ccatacagcgttcgtgtggtttctgaaatcactgaatctaacggttcaagctcaatggct
tctgtatgtggtacttcacttgcgcttatggatgcgggtgtaccaattaagacttcggta
gctggtatcgctatgggtctagtgaaggaaggcgacgacttcgttgttctttcagacatt
ctaggtgacgaagaccacttaggtgacatggactttaaagtagcgggtactcgcgacggt
atcaccgctttgcaaatggatatcaagatcgaaggtattactaaagagatcatggatatc
gcactgcaacaagcttacggcgctcgcgttcacattctaaacgtaatggaccaagcgatt
tctggtgcacgtgaagagatttctgatcacgctccacgtatcacgactatcaaaatcaac
cctgagaagatccgtgacgttatcggtaaaggtggcgcgactatccgtgcacttaccgaa
gaaactggcacgactattgagcttgatgacgacggtacagtgaagattgcttctgctgat
ggcgctgcgactaaagaagcgattcgccgcattgaagaaatcactgccgaagttgaagtg
ggtcgtatctacaagggtaaagttatccgtatcgttgatttcggtgcgttcgttaatatc
ttacctggtaaagacggtcttgttcatatctctcagatcagcgaagagcgcgtagctaac
gtatctgatcacttagaaatgaaccaagaagtggcagttaaggtaatggaagttgatcgc
caaggtcgcgttcgtctttctattaaagaagcacaagctaaagaagaagctgcagagtaa
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