Shewanella maritima: EXU30_05445
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Entry
EXU30_05445 CDS
T06365
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smai03016
]
EXU30_05445 (truB)
Enzymes [BR:
smai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EXU30_05445 (truB)
Transfer RNA biogenesis [BR:
smai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EXU30_05445 (truB)
Prokaryotic type
EXU30_05445 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Exog_C
Motif
Other DBs
NCBI-ProteinID:
QBF82207
UniProt:
A0A411PF32
LinkDB
All DBs
Position
complement(1297434..1298372)
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AA seq
312 aa
AA seq
DB search
MARRQKGRFINGIVLLDKDTGMSSNHALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDSDKRYTVIAKLGQRTDTSDSDGEVVQEREVNFTDEQLQTALEHFRGDTMQ
VPSMFSALKYQGQPLYKYAREGIEVPREARPITVFELNFLGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVATYPYDRMVSLAQLEKLVDQAKEQGVEPSDLLDPLL
LPMDTAVSHFAEVNLPQAMLEYVMRGQAIQAPGLQPDELVRITIGDAKQFVGIGSMNNDG
LLAPKRLVVLRD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcaaaaaggtcgctttattaacggtattgtgctgctagataaagatact
ggcatgagctcgaatcatgctctgcaacgcgttaagcgtttctttaatgccaacaaagca
gggcataccggtgcgctagacccattagcaacgggtatgttgcctgtgtgtcttggtgaa
gcgactaagttttcgcagcatttactcgactctgataagcgttatacggttatcgccaag
ttaggtcagcgtaccgacactagcgattcagatggcgaagttgtacaagagcgtgaagtc
aatttcactgatgagcagctgcaaactgcactcgagcattttcgcggcgataccatgcaa
gtgccatcaatgttttcagcgcttaagtatcaaggccagccgttatacaagtatgctcgt
gaagggattgaagtgccgcgtgaggcgcgtccaattaccgtttttgagcttaacttttta
ggcttagaaggtgatgagctcaccttagatattcactgctctaagggtacttatattcgc
accattattgatgatttgggcgagatgctaggctgtggcgcgcacgtgattatgctgcgc
cgtactcaggtcgcaacttatccttatgatcgcatggtaagtttagctcagctagaaaag
ctcgttgatcaagctaaagagcagggggtcgagccgagtgatttactcgacccgctttta
ctgccaatggataccgctgtaagccattttgcagaggttaatctacctcaagctatgctt
gaatatgttatgcgtggacaagcgattcaggctcctggattacagcctgatgaactcgtt
aggatcaccataggtgatgctaaacagtttgtgggtattggcagcatgaataatgatggt
ttgctcgctcctaagcgcctcgttgtgcttcgcgattag
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