Shewanella maritima: EXU30_07415
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Entry
EXU30_07415 CDS
T06365
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
smai
Shewanella maritima
Pathway
smai00630
Glyoxylate and dicarboxylate metabolism
smai00680
Methane metabolism
smai01100
Metabolic pathways
smai01120
Microbial metabolism in diverse environments
smai01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EXU30_07415
09102 Energy metabolism
00680 Methane metabolism
EXU30_07415
Enzymes [BR:
smai01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
EXU30_07415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Fer2_4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer4_7
DAO
Fer4_6
Fer4
FAD_binding_2
NAD_binding_7
FAD_binding_3
FAD_oxidored
HI0933_like
Fer4_8
Fer4_18
Fer4_9
Thi4
Fer4_15
Fer4_10
AlaDh_PNT_C
F420_oxidored
Fer4_2
MurD-like_N
GIDA
Fer4_21
Amino_oxidase
Fer4_17
Fer4_16
Fer4_Nqo3
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QBF82543
UniProt:
A0A411PG59
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All DBs
Position
1707013..1711236
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AA seq
1407 aa
AA seq
DB search
MISLNIDGKLVTVEPEQNLLQAATKAGITIPSLCDPINSQSTKLQHKQDCNLCIVEINNH
DASCRTAKACQTKVSDNMQVTTQSSQLSEIRRNALTDILSDHFADCEAPCQTACPAGVDI
QSYLFHIAQGNHTEAVKVIKQTLPLPLSIGRVCPAFCEAECRRGLVDEPVAIRQLKRHAA
DLDLADEHSYQVERKADTGKKVAIIGSGPAGLSAGYFLSNQGHQVTIIESMPEAGGWLRY
GIPEYRLPKDILDKEIALLCTNGLDIRTNTRLGQDVHLKQLTDDYDAVCLAIGAQKAVAM
EYPGSELGGCYLGVDYLRDYCTVKTYKIGKKVAVIGGGNTAIDCARTAVREGHDVTIIYR
RTKDAMPAEPYEIHEAEVEGVKFHFLTNPVKNISDDNGQVCAIELAKMALGEPDSSGRRS
PKATGDTFIEQFDTVIAAVSQTPDMSFLEHPGSHLTSGELALSRWNTFIGCEHTMSAGVD
KLFVIGDSRRGPATAVAAIGDGRKAAIAIDKQLKQGLSCELTKQAFNSTKANNTSELSAE
LYPSIKPQARYKMSELSAIERELNFNEVEQGFEPDDAMKEAARCLECACQANTDCKLRDY
ATEYHVDSKQLNASQMQRFSVDKTTPFIQFDANRCISCGKCVDICGQQSGHNVIQFEQDS
YQALPNELVGTEQRRAPRVGFNVTMAESACVQCGNCVQVCPTGALVDARDKRQGATEKLE
TTSTICTYCGVGCRINVSVSPSTGKICHVEGSKDSDVNEGMLCVKGRFGFDFIQSEQRLT
TPLMRKNGQLEPCSWDDAISAIASRFSAIKAAKGGDAIATLASAKATNEDNFLLQKFVRS
VLGTNNVDHCARLCHSSTVSALQQSLGSGAMTGDIPGIKDSDLIFILGSDTCNAHPIIAS
KIKQAIRVHGARLMVADPKRVSIADDAELYVAQKPGSDVALINAIMGEIIRNDWHDKAYI
DTHTEQFDAVKQCVLQQKYLPKQAAKICGVSADDIKHMAKLIGTADKTAIYYAMGVTQHT
SGHDNVTAISNLQMLMGNLGKSGAGINPLRGQSNVQGACDMGALPQYYTGYQKVDNPVVQ
AKFEQVWNTQLSPNVGLTATEVMSAICEQKVDALFVMGENPVLSDPDQAHVIDALERLPF
LVVQDIFLTETAQYADIVLPAAAFAEKHGHFTNTERRVQRLEPVLTPPGQAKQDWRIVQA
IANNMGANWQYDNEQAITAEINLVTPQYQGITWARLNNDTDGKPAIGIQWPCADEQHPGT
PVMHANGPVRGKGLFTAVEYRAAAEETCEEYPLVLSTGRLLEQFHTGTLSRKTQGLDKLG
QPQVMISVYDAEKLGIGNGEVIKLSTRRGEITIRAFVTKRAQAGVLFLPFHFVEAAANKL
TINAVDPVAKIPEYKVCAVKAERLEAL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatttcactcaacatagacggcaagctcgtcactgtcgagccggagcaaaacctgctc
caggcggctactaaagctggcataactattccaagtttatgcgacccaataaatagccaa
tcgaccaagctgcaacacaagcaagactgcaacttgtgcatagtagaaatcaataaccac
gatgccagttgccgcactgctaaagcatgtcaaacaaaagtgagtgacaatatgcaggtc
accacccagagtagccaactcagtgaaattcgccgcaatgcattaaccgacatcctgtcg
gatcattttgctgactgtgaagcaccgtgccaaacagcctgccctgctggtgtcgatatt
caaagttacttatttcatatcgcccaaggcaatcacactgaagcggtaaaagtgattaag
caaactctgccattgcccttatctattggccgcgtatgcccagccttttgtgaggcagag
tgccgccgaggcttggtagacgaacccgttgctatccgccaactaaaacgccatgcagcg
gatctcgaccttgctgatgagcacagttaccaggttgagcgcaaagctgacacgggcaaa
aaggtcgccattattggcagtggccctgcgggattaagcgcaggttactttttatctaac
caaggccatcaagtcaccattattgagtccatgcctgaagcaggtggctggctcagatac
ggcatacctgaatatcggctgccaaaagacatacttgataaagaaatagcacttttgtgt
accaatggcttagacataagaactaatactcgcctcgggcaagatgtacatttaaaacaa
cttaccgacgactatgatgcggtttgtttagcgattggcgcgcaaaaagcggtagccatg
gagtacccaggcagcgaacttggcggctgttatttaggggttgattacctgcgtgattac
tgcaccgtaaaaacctataaaataggcaagaaagttgcggtcataggcggtggtaacaca
gctatcgactgcgcccgaacagccgtgcgcgagggccatgatgtcacgattatttatcgc
cgcactaaagatgccatgcctgctgaaccttacgaaatccatgaggcggaagttgagggt
gttaagttccacttcttaactaacccagtcaaaaatatcagtgacgacaacggccaggtt
tgcgctatagaactagcaaaaatggctttaggcgagccagactcatcaggtcgccgctca
ccaaaagccacgggcgatacctttatagagcagtttgataccgtcattgctgcggtttca
caaacgcctgatatgagctttttagagcatccaggtagccacttaacctcgggcgagctg
gcactatcacgctggaacacctttattggctgtgaacatactatgtcagcaggcgttgat
aagttatttgtgattggcgactcgcgtcgcggcccagcaaccgctgttgctgcaattggt
gatggtcgcaaagccgcaattgccattgataagcaactaaaacaagggctgagctgtgag
ttaaccaagcaagcattcaactctaccaaggcaaataacacctcagagctatctgctgag
ctttatccaagcatcaaacctcaagctcgctacaaaatgagtgagttaagcgctattgaa
cgtgaacttaactttaatgaggttgagcaaggctttgagccagatgatgccatgaaagaa
gcggcgcgctgcctggaatgtgcctgccaagccaataccgactgtaaacttcgcgactac
gcaaccgaataccatgttgatagtaagcaattaaatgcaagccagatgcagcgttttagt
gtggataaaaccacgccgttcatccaatttgatgccaatcgctgtatcagctgtggcaaa
tgcgtcgatatctgtggtcagcaaagcggtcacaacgtgattcagtttgaacaagacagc
tatcaagcattgccaaatgaattggttggcacagagcagcgccgcgcaccgcgcgtgggc
tttaatgtcactatggcagaaagtgcctgtgtgcagtgtggtaactgtgtgcaggtttgc
ccaaccggtgcactcgttgatgcacgcgacaaacgtcagggcgcaacagaaaaattagag
acaacctcaactatttgcacctactgcggtgtgggctgtcgcatcaatgtcagcgtgtcg
ccatcaacgggtaaaatatgccatgttgaaggcagtaaagactcagatgtcaacgaaggc
atgttatgtgtcaaaggtcgtttcggtttcgactttattcaaagtgagcagcgtcttacc
acaccattaatgcgcaaaaacggtcagcttgagccatgctcatgggatgacgcaatatct
gctatcgccagccgttttagtgcgattaaagccgctaaaggcggtgatgctattgctaca
ctggcatcagcaaaagcgactaacgaagataacttcttactgcaaaaatttgtccgcagc
gtattaggcactaacaatgttgatcactgtgcgcgcctttgtcactcaagtactgtttct
gcgctgcaacaaagcttaggcagcggcgccatgacaggtgatattccgggaattaaggac
tcagacttaatctttattttgggctcagacacctgtaatgcccacccgatcatcgcgtct
aaaatcaaacaagccattcgagtgcacggagctcggttaatggttgctgatcctaaacgc
gtatcaatcgccgatgatgctgagctatatgtcgcgcaaaaacctggcagcgatgttgcg
ctaatcaacgccatcatgggtgagattattcgcaacgactggcatgacaaagcctatatc
gatacccataccgaacaatttgatgcagttaagcaatgtgtattgcagcaaaaatatctt
ccaaagcaagccgcgaaaatctgcggcgtgtcagctgatgatatcaaacacatggctaag
cttattggcactgcggataaaacggctatctactacgccatgggcgtcacccagcatacc
tcagggcacgataacgttaccgcgatttctaacttgcaaatgctgatggggaacctaggt
aaatcaggcgctgggattaacccactgcgtggtcagagtaacgtacaaggcgcttgtgat
atgggcgcgctacctcagtactatactggctatcaaaaagtggataacccagttgtacaa
gctaaatttgaacaagtctggaatacccaactatcaccgaatgtgggcttaacggctaca
gaagtaatgagcgcgatttgcgagcaaaaggtcgatgcgctgtttgtgatgggtgaaaac
ccagtacttagcgacccagatcaagctcacgtgattgacgcgcttgaaaggctaccgttt
ttggtagtgcaagatatcttcttaaccgaaacggctcagtatgctgacatcgtattacct
gcagctgcattcgcagaaaagcatggccacttcaccaatactgagcgccgagtgcaacgt
ttagaaccagtgctaacaccacccggtcaagccaaacaggactggcgtatcgtacaggca
attgccaacaacatgggcgcaaactggcaatatgataatgaacaagcgattaccgctgaa
atcaatctggttacgccacaatatcaaggcatcacctgggcgcgtttaaacaatgacaca
gacggcaagcctgctataggcattcaatggccgtgtgcagatgagcaacatccaggcaca
cctgtgatgcatgctaatggtccggttcgtggtaaaggcttattcacggctgttgagtat
cgcgccgcagctgaagaaacctgtgaggaatatccgttagtgttgtcgactgggcgacta
cttgagcagttccacacaggtacgctaagtcgtaaaacccaaggtttagataagctaggt
cagcctcaggtgatgatttcggtttatgatgctgaaaaactggggattggtaatggcgaa
gtcattaagctatctacccgccgcggtgaaatcaccatacgcgcgtttgttaccaaacgt
gctcaagcgggcgtgctgtttttgccattccactttgttgaagccgctgcaaacaaacta
acgattaatgctgtcgaccctgtcgctaagatccctgaatacaaggtctgcgcggtcaaa
gctgagaggttagaagcgttataa
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