Shewanella maritima: EXU30_07820
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Entry
EXU30_07820 CDS
T06365
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smai
Shewanella maritima
Pathway
smai03420
Nucleotide excision repair
smai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXU30_07820
03430 Mismatch repair
EXU30_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_07820
Enzymes [BR:
smai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXU30_07820
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXU30_07820
MMR (mismatch excision repair)
Other MMR factors
EXU30_07820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBF82610
UniProt:
A0A411PGV6
LinkDB
All DBs
Position
complement(1819439..1821634)
Genome browser
AA seq
731 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPLSNMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVENVVGSNMGRMWIGTFHGLAHRLLRTHYQDANLPQTFQIIDSDDQV
RLIKRILKTLNLDEKQYPPRQAAHYINGKKDQGLRPKHIDAGGFPIEQNLLNIYKIYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRVLAGNS
ANVMIVGDDDQSIYGWRGAQIENLHKFLSDFPGAETIRLEQNYRSTANILNASNDLIANN
PDRLGKKLWTEDKDGEPISVYCAFNEMDEARFIVGRIIDWQDKGGRLSDCAILYRSNAQS
RVLEEAFLHKGLPYRIYGGLRFFERQEIKDAMGYMRLINNRDDDAAFERIVNTPTRGIGD
RTVEIIRNTARQHQLTLWQACLRLLEEKVLAGRAANAVRNFIDLIITLKTDTEDMLLYRM
TDSVIDRSGLRAMYEAEKGEKAQARIENLNELVTAARSFEMPEELEDMGELNAFLSHAAL
EAGEGQADEFTDAVQLMTLHSAKGLEFPMVFMSGVEEGIFPSKMALEEGDRLDEERRLCY
VGMTRAMQKLYISYAESRRMYGREDYASPSRFIGEIPEKYVEQIRLRAQVSPSISQRFPS
QASPSFGSGLGTSGPANSTGFTIGQKVKHFKFNEGIVTNFEGTGEKARIQVNFFDFGSKW
LLVSLAKLEAC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcatctttactcgacggcttaaacgacaaacagcgtgaagcggtcggcgca
cccctttcaaacatgttagtacttgctggtgcaggtagtggtaaaactcgggtgctgacg
catcgtattgcctggctgatgcaagttgaacagcaaagtccttattctattttggcggta
acctttaccaataaagctgcggcagaaatgcgcgagcgggtagagaacgtagttggcagc
aacatggggcgtatgtggattggtactttccatggcctagctcaccgcttgctgcgcacc
cattatcaagacgctaacttgccgcaaactttccagattattgattctgacgatcaggta
cgtttaatcaaacgtattttgaaaaccttaaaccttgatgagaagcagtatcctccacgc
caagctgcgcactacattaacggtaaaaaagatcagggtttgcgccctaagcatattgat
gctggcggcttcccgattgagcaaaacttattaaatatctacaagatttatcaggagtct
tgcgatagagcaggcttggtagattttgctgaaatcctgctgcgcgcccatgagttatgg
ctcaataaaccgcatttattggcgcattatcaagagcgttttaagcatattctggtggac
gaattccaggatactaacgctattcaatatgcctggattcgtgtgttggcgggcaatagc
gccaatgtgatgattgtaggtgatgacgaccagtcgatttacggctggcgcggtgcacag
attgaaaacctgcataagtttttaagtgattttccgggcgctgaaaccatccgcttggag
caaaactatcgctcaacagccaatattcttaatgcatcgaacgatcttatcgccaacaac
ccggatcgcttagggaaaaagctatggactgaagataaagatggcgagccaatctcagtg
tactgcgcttttaacgagatggatgaagcgcgctttatcgttgggcgaattattgattgg
caagataaaggtggccgcttaagtgattgcgccatcttatatcgctctaatgctcagtcg
cgggtattggaagaagccttcttacacaagggcttaccgtaccgtatttatggcggtttg
cgcttcttcgagcgtcaagagattaaagatgccatggggtatatgcgtcttatcaacaat
cgtgacgatgatgccgcctttgagcgtattgtgaatacgccgactcgcggtattggtgat
cgcacagttgagattatccgtaacaccgcaaggcaacatcaattgaccttgtggcaagca
tgtttgcgtttgcttgaagaaaaagtccttgcaggccgtgcagctaacgcggtgcgcaac
tttatagatttaattatcaccctaaaaaccgataccgaagacatgctgctatatcgcatg
acagatagcgtgattgaccgctctggtctgcgcgctatgtacgaggctgaaaagggtgaa
aaggcacaagcgagaattgaaaacttaaacgagctagtcacggctgctcgcagttttgaa
atgcctgaagagcttgaggatatgggcgagctgaatgcgtttttatctcatgcggcacta
gaggcgggtgaaggtcaggctgacgagtttactgatgcagtgcagttaatgacgctgcac
tcagctaaaggtcttgagtttcctatggtgtttatgtcgggcgttgaggaaggcattttc
ccaagcaagatggcattggaagagggcgatagactcgatgaagagcgtcgtctgtgctat
gtaggcatgacccgagcgatgcaaaaactctacattagttatgcagaatcacgccgtatg
tatggccgtgaagactacgcatcgccatcgcgttttattggcgaaattcctgaaaaatat
gtagagcaaattcgcctgcgtgctcaggtgtcgccatcaatcagccagcgttttccttct
caagccagcccgagttttggtagtggcttaggtaccagtggtccagcaaacagcacaggt
tttactatcgggcagaaggtgaagcattttaagttcaacgagggtatcgtcaccaacttt
gaaggcactggtgaaaaggcgcgcattcaggtcaacttttttgattttggcagtaaatgg
ctgttagtctcattagctaagcttgaggcctgttaa
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