Shewanella maritima: EXU30_08545
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Entry
EXU30_08545 CDS
T06365
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smai03021
]
EXU30_08545 (rpoH)
Transcription machinery [BR:
smai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXU30_08545 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QBF82731
UniProt:
A0A411PGN4
LinkDB
All DBs
Position
complement(2003738..2004598)
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AA seq
286 aa
AA seq
DB search
MTSQSQSMALAVPQNISSIEAYLQSVTSIDMMDAETEHKLAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKTKKRLGWFSDEEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLASDNDDDKQDYAPALYLEDHSSDVAEQVENANWEADSQSRLLSAIKTLDERSQ
HILRARWLDDDKTTLQELAATYQVSAERIRQLEKNAMNKLKSQMDM
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcaatcgcaatcaatggcgctagcagttcctcaaaatattagttctattgag
gcttatttgcagtctgttaccagcatcgacatgatggatgcggagactgagcacaagctt
gccaaacgtttacaagaaacaggcgatttacaagccgcaaagcagttgattatgtctcac
ctgcgttttgttgtgcatgttgcaaaaggctattctggatacggtttaccacaagctgac
ttaatccaagaaggtaacattggtctgatgaaggcggttaagcgcttcgacccagatgtt
ggtgttcgtctagtgtcatttgctgtgcactggattaaggctgaaattcatgaatacgta
ctgaaaaactggcgtattgtgaaagtggcgaccactaaagcgcagcgaaaattattcttc
aatcttcgtaaaactaaaaagcgtttaggctggtttagtgacgaagaagtcaccatggtg
gcagaaaacctaggtgtatcgaaagctgacgtgactgagatggaatcacgtatggcagcg
caagatcctgcatttgatttggcatcagacaatgatgatgacaagcaagactatgcgcca
gcgttataccttgaagatcactcttcagatgtggctgagcaagttgaaaatgccaactgg
gaagccgattctcaaagccgtctactgtctgctattaagaccttagatgagcgcagccag
cacattctacgtgcgcgttggttagacgatgataaaaccacgctgcaagagttagcggcg
acttatcaagtgtcagcagagcgtattagacagcttgaaaagaacgcgatgaacaagctg
aaatcgcagatggatatgtaa
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