Shewanella maritima: EXU30_10880
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Entry
EXU30_10880 CDS
T06365
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smai
Shewanella maritima
Pathway
smai03030
DNA replication
smai03410
Base excision repair
smai03420
Nucleotide excision repair
smai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU30_10880 (polA)
03410 Base excision repair
EXU30_10880 (polA)
03420 Nucleotide excision repair
EXU30_10880 (polA)
03440 Homologous recombination
EXU30_10880 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smai03032
]
EXU30_10880 (polA)
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_10880 (polA)
Enzymes [BR:
smai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU30_10880 (polA)
DNA replication proteins [BR:
smai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EXU30_10880 (polA)
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EXU30_10880 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXU30_10880 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QBF83142
UniProt:
A0A411PIC2
LinkDB
All DBs
Position
complement(2548074..2550830)
Genome browser
AA seq
918 aa
AA seq
DB search
MATIPNNPLVLIDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYNPSHVAV
VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIAPLHRIIRALGLPLIAIEGVEADDVIGT
LARQASADGRATLISTGDKDMAQLVDDNVTLINTMTDTIMGPEEVTTKFGVGPELIIDYL
ALMGDKADNIPGLPGVGEKTALAMLTSVGSVDTLLANPDAVVDAGFRGAKSMPKKINDNA
ELLKLSYQLATIKLDVELEQTWQQLEIQPQNRDELVACYGEMEFKRWLAEVLDNKSGAAT
TATESEEAPSAKADIETEYQTIVTEAELDAWIEKLTQAELMAIDTETTSLNYMEAELVGL
SFAVEAGKAAYVPVGHDYAGAPEQLSKQLVLDKLRPILEADKPAKVGQNLKYDISILANQ
GVKLKGIQFDTMLESYVFNSVASRHDMDGLALKYLGHKNISFEQIAGKGAKQLTFNQIDL
ETAGPYAAEDADITLRLHQHLWPRLEKQGELAKVFTELELPLINILSDIERNGVYIDSML
LSQHSQELAQKLDELEQKAYEIAGEKFNLASPKQLQGLFFEKLGYPIIKKTPKGAPSTSE
EVLVELALDYPLPKIILEHRSLSKLKSTYTDKLPLMVNPVTGRVHTSYHQANAATGRLSS
SEPNLQNIPIRTEEGRRIRQAFVAPEGKKILAADYSQIELRIMAHLSQDKGLLSAFAEGK
DIHRATAAEVFGVHFEEVTSEQRRRAKAVNFGLIYGMSAFGLAKQLDIARAEAQSYIDTY
FARYPGVLKYMEDTRAEAAELGYVSTLFGRRLYLPDIKDRNAMRRQAAERAAINAPMQGT
AADIIKKAMISVANWIEQDTSGEITMLMQVHDELVFEVDADKADSLQAKVCELMAAAASL
DVTLLAEAGIGDNWQQAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcccaaacaacccactggtactaatcgacggctcttcatacctttaccgt
gcttattatgcaccgccacatttaaccaactctaagggtgaagcaaccggtgccgtatat
ggcgttgtcaacatgcttagaagcctactttctcgttacaacccaagtcatgtcgctgtg
gtatttgacgctaagggtaagactttccgtaacgacatgtacagcgaatacaaagcccag
cgcccacctatgccagatgatctgcgtagccaaattgcgccgctacaccgcattatccgt
gcgctaggtttgcctctgattgccattgaaggcgttgaagcagatgacgttatcggcacc
cttgctcgtcaagcaagtgcagacggccgtgcaacactaataagcactggcgataaagac
atggcgcaattggttgacgacaatgtcaccctaattaacaccatgaccgacaccattatg
ggtcctgaagaggtaaccaccaagtttggtgttggccctgagttaatcatcgattaccta
gccttaatgggcgacaaagctgacaacattcctggcctgccgggtgtgggcgagaaaacc
gctcttgccatgctgactagcgttggcagtgtcgataccctgctggctaaccctgatgcc
gttgtcgatgccggtttccgtggtgctaaatcgatgccaaagaaaatcaacgacaacgcc
gagctgctcaaactgtcgtaccagcttgctaccattaaactcgatgtagagctagaacaa
acctggcagcaactagaaatccaaccacaaaaccgtgacgagctagtggcttgttatggc
gagatggagttcaagcgctggttagcagaagtattagacaacaaatctggcgctgcaacg
actgcaactgagtcagaagaagccccaagtgcaaaggcagatatagaaactgagtaccaa
accattgttactgaagcagagcttgatgcctggattgaaaaattaacccaggcagagcta
atggctatagatactgaaaccactagcctcaattatatggaagctgagctagtgggatta
tcgtttgccgtagaagctggcaaagcagcctatgtaccagtcggccacgactacgcaggc
gcgccagagcagttaagcaagcagctagtgcttgataaattgcgccctattttagaggct
gacaaaccagctaaagtaggccaaaaccttaaatacgacatcagtattcttgccaatcaa
ggcgtgaagcttaaaggtatccaattcgataccatgttggagtcgtacgtatttaattct
gtagcatcgcgtcacgatatggatggtttagcacttaaatatctagggcataaaaacatt
agctttgagcagattgccggtaaaggtgcgaagcagcttacctttaatcaaatcgacttg
gaaactgctggcccatacgcagccgaagatgctgacattaccctgcgtttgcatcaacac
ctgtggccacgtcttgagaaacaaggcgagcttgccaaggtgtttaccgagcttgaattg
ccactgattaacattttgtcagatattgagcgtaatggcgtttacatcgactctatgttg
ctaagtcagcacagtcaggagcttgcgcaaaagctagatgaattagagcaaaaggcttat
gagattgcaggcgagaagttcaatctagcatcacctaagcaattacaaggcttgttcttt
gaaaagcttggctacccgattatcaagaaaacccctaaaggtgcaccatcaacttcagaa
gaagtgttagttgagttagcactcgattacccgctgccaaagatcattctcgagcaccgc
agtttatctaagctaaaaagcacctataccgacaagctaccgttaatggtcaaccctgtt
actggccgcgtacataccagttaccaccaagccaatgcggctacaggtcgtttgtcatca
agtgagccaaacctgcagaatattccaattcgcaccgaagaaggtcgccgtattcgccag
gcatttgttgcacctgaaggtaaaaagattctggccgccgactactcgcaaattgaactg
cgtattatggcgcacctatcgcaagacaaaggcctacttagcgcctttgctgaagggaaa
gacattcaccgcgcgaccgctgcggaagtatttggcgttcactttgaagaagtgactagt
gagcaacgccgccgcgctaaagcggttaactttggtttgatttacggcatgtctgccttt
ggcttggccaagcagcttgatattgctcgcgcagaagctcagtcgtacatcgacacctac
tttgcgcgctacccaggtgtactaaagtacatggaagacactcgcgctgaagctgctgag
cttggctatgtatcaaccttgtttggccgccgcttgtatctacctgatattaaagatcgc
aatgcaatgcgccgtcaggccgcagagcgcgctgcgattaacgcgccaatgcaaggtaca
gctgctgacattattaaaaaggcaatgattagcgtagctaactggattgaacaagacacc
agcggcgagatcaccatgctaatgcaagttcacgatgagctggtatttgaagtcgatgca
gacaaagctgacagcctacaagctaaggtttgtgagctaatggccgcagccgcgagcttg
gatgttacattgctagccgaagctggtattggtgacaactggcagcaagctcactaa
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