Shewanella maritima: EXU30_12560
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Entry
EXU30_12560 CDS
T06365
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smai
Shewanella maritima
Pathway
smai00061
Fatty acid biosynthesis
smai00071
Fatty acid degradation
smai01100
Metabolic pathways
smai01212
Fatty acid metabolism
smai02024
Quorum sensing
smai04146
Peroxisome
Module
smai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EXU30_12560
00071 Fatty acid degradation
EXU30_12560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EXU30_12560
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXU30_12560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smai01004
]
EXU30_12560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smai04147
]
EXU30_12560
Enzymes [BR:
smai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EXU30_12560
Lipid biosynthesis proteins [BR:
smai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EXU30_12560
Exosome [BR:
smai04147
]
Exosomal proteins
Exosomal proteins of breast milk
EXU30_12560
Exosomal proteins of breast cancer cells
EXU30_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBF83436
UniProt:
A0A411PIM6
LinkDB
All DBs
Position
complement(2921733..2923388)
Genome browser
AA seq
551 aa
AA seq
DB search
MENVIKNPLEMLSHWVDTQGDKVYLRQPINGQYVEFTWKQVKQQVELIAGALHHLGLKRG
DKVAILSKNCAEWFITDLALMHGGFISVPIYPTANADTIRYVLEHSGSKAIFSGKLDYWA
EQETGVGGDILRLSMPYDTMPCQYSWQQLLDFNDPLLDAPNPEPEQTMTLIYTSGSTGKP
KGAIQTFASYAWTCNAVVRDLKTTVDDRLLSYLPLAHITERVAMEGSSYYSGSSVAFVES
LDSFVEDVQRCRPTVFFSVPRLWTLFHLNIVNKVGESKLNFLLKIPIISSLVKRKIHKGL
GLEHCRLLGSGSAPVPASLLQWYSDIGLNICEAWGMTENCAYSIINHPFNANKIGSVGRP
IEGCQVRRTDEGELMVKSPGLMQGYYLQEEATAAAFDEDGFFYTGDICEIDDDGYISITG
RVKDNFKTSKGKYVAPVPIERKLAQDSHLELICVIGSGLPHPVALVQLSEGAAKQPREEV
RASLKATLDSVNPNLESHEHVDAMIVTTDTWTVENDILTPTLKIKRHVLEKQFNAKAEGI
RGAKVMWEDEI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtaatcaaaaatcccctcgagatgctgtcccattgggtagatacacaaggc
gataaagtctatttacgccagccaatcaacggacaatatgttgagttcacctggaagcaa
gttaagcaacaagttgagcttattgctggtgcgctgcatcacctaggtctaaaacgtggc
gacaaagtcgctatcttgtcaaaaaactgtgctgagtggtttattaccgaccttgccctt
atgcatggcggctttattagcgtaccgatttacccaacagccaacgctgacaccattcgt
tacgtacttgagcacagtggtagtaaagccattttctcaggtaagttagactattgggcc
gagcaagaaacaggtgttggtggcgatattctgcgtttatccatgccttatgacaccatg
ccgtgccaatatagctggcagcaacttttagactttaacgacccactattagacgcgcct
aacccagagccagaacaaaccatgacgctgatttacacctctggttcaactggtaaacct
aaaggtgcgattcaaaccttcgccagctacgcctggacatgtaatgccgttgtgcgtgac
ttgaaaaccacggtggatgatcgcttattgtcttatctgccgcttgctcatattacagaa
cgcgtagcaatggaaggttcatcatattactcaggctcgagtgtcgcctttgtagaaagc
ctagatagctttgttgaagacgtacaacgttgccgcccaacggtatttttctcagtaccg
cgattatggacactattccatctcaacatcgtcaacaaagtcggcgagagcaagcttaac
ttcttgcttaaaatcccgattatttcgagcctggttaaacgcaaaatccacaagggttta
gggcttgaacattgtcgcctactgggttcgggttcagcaccagtaccagcatcattatta
caatggtatagcgatattgggcttaatatttgcgaagcctggggcatgacagaaaactgc
gcatactccatcatcaatcatccatttaatgccaacaaaattggcagtgtgggtcgccca
attgaaggctgccaagttcgccgcacagatgaaggtgagctaatggtgaaaagcccaggc
ctgatgcaaggctattacttgcaagaagaagccaccgctgccgcatttgatgaagatggc
tttttctacaccggtgatatttgtgagattgatgatgacgggtacatcagcatcacaggc
cgcgtgaaagacaactttaagacctctaagggtaaatatgttgcaccagtgccgattgag
cgtaagctcgcacaagattcacaccttgaattgatttgcgtaattggttcagggctgccg
cacccagttgcattagtacagctatctgaaggtgcagcaaaacagcctcgtgaagaggtg
cgcgcgtcacttaaagcaacgcttgatagcgtcaaccctaatctagagtctcatgagcac
gttgatgccatgattgtcactacagatacctggacggttgagaacgatattctcacccca
acgcttaaaatcaagcgccatgtgcttgaaaagcaattcaacgctaaagccgagggtatt
cgcggcgctaaagtgatgtgggaagacgaaatctaa
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