Shewanella maritima: EXU30_17185
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Entry
EXU30_17185 CDS
T06365
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smai
Shewanella maritima
Pathway
smai03030
DNA replication
smai03430
Mismatch repair
smai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU30_17185
03430 Mismatch repair
EXU30_17185
03440 Homologous recombination
EXU30_17185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smai03032
]
EXU30_17185
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_17185
Enzymes [BR:
smai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU30_17185
DNA replication proteins [BR:
smai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU30_17185
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU30_17185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QBF84211
UniProt:
A0A411PL40
LinkDB
All DBs
Position
4053506..4056982
Genome browser
AA seq
1158 aa
AA seq
DB search
MTDPRFVHLRVHSDFSMSDGVAKVKPILAAAEEQQMAAIALTDQNNLCGLVKFYDGCHGK
GIKPIIGADFWMQVPGFDNDFCALTVIAMNDAGYLSLKLLISEAYSRGQIDGKTVIDQDW
LRKYNDGILLLSGGKDGDIGKALIKGNMTQAHELVEFYQQHFADRYYLELIRTGRADEER
YIQMAVELASEVGLPVVATNQVVFLKAEDFDSHEIRVAIHDGFTLADPRRPKKYSEQQYL
RTADEMCALFDDIPSALSNTVEIAKRCNATVKLHEYFLPDFPTGDLSIDDYLVEVSRTGL
QERLEFLFPDEQERAEKRPEYDERLEIELKVINDMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAE
LYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRLTKMIPAEPGMTLAKAFEVEPS
LPEAYDADEDVRELIDMCRRLEGVTRNAGKHAGGVVISPTTITDFAPLYCDSEGLNPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALQMINPRLAREGKEPVRIEAIPLDDLKSFRLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGREE
VSYPDQQYQHECLKELLSPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEEM
AKQRGTFKEGAINNNIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMSADMDNTDKIVTLVDECERMGLPLIPPDVNKGLFKFTVDDEQNIVYGIGAIKG
VGEGPVDSILEARKDGPFKDLFDFCARIDLKKLNKRVIEKLIAAGALDSLGPHRAAMHAT
LPEAISAAAQHAKAESIGQSDMFGLLNDTPEDSKQQFVECTPWPDKVWLEGERETLGLYL
TGHPINQYLKELRQYTSGRLKDAHPTGRGKTIKVAGLVVGTRVMVTKRGSKMGLVTLDDK
SARLEVMLFTEAFEKFGHLLEKDKILICEGEVAVDDFSGGNRMNARNIIEIGEARSHFAK
AVEINLQAEQVTPKWLTDFEQTLTPWRGGAVPVVITYSQNSAQGQLQLGEQWRVNPTDEL
MLDLETLVGSANVKISFN
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctcgtttcgtccatttacgtgttcacagtgacttttccatgtcagacggt
gtcgccaaggttaaacccattttggccgccgctgaagagcaacagatggcagcgattgcg
ttaactgaccagaataacttgtgcgggttagtgaagttttatgacggttgtcatggcaaa
ggcattaaacccattattggcgctgatttttggatgcaggtgccaggctttgataatgat
ttttgtgcattgactgtcattgccatgaatgatgctggctatttaagccttaaattgctg
atcagtgaggcctactcaagagggcaaattgacggtaaaaccgttattgatcaagactgg
ctgcgcaaatacaacgacggcattttactgctatctggtggcaaagacggcgacattggt
aaggccctaattaaaggcaatatgactcaggctcatgagctggttgagttctatcagcag
catttcgctgaccgttattatcttgagcttattcgtactggtcgagcagatgaagagcgt
tatattcaaatggcagtggagctggcctctgaagtgggcttgcctgttgttgcgaccaac
caagtggtatttttaaaagcagaagatttcgattctcacgaaatccgtgttgcgattcat
gatggctttacgctagccgacccccgtcgccctaaaaaatacagtgaacaacaatatcta
cgcacagctgatgaaatgtgcgccttatttgacgatattccatcagccttaagcaatact
gtcgaaattgccaagcgttgcaacgcgacggttaaattacacgagtacttcctacctgat
tttccaactggtgatctttcgattgatgattatctggttgaagtgtcgcgcacaggtctg
caagaacgcttagagtttttgttccctgatgaacaagagcgcgctgaaaaacgtcctgaa
tatgatgagcgtttggaaattgagctaaaagtaattaacgatatgggcttccctggttac
ttccttatcgtaatggagttcattcaatggagtaaggataacgatattcccgtaggacca
gggcgtggttcaggtgcgggctctttggttgcttacgcacttaagattactgaccttgac
ccactcgaatttgacttactgtttgagcgattcttgaaccctgaacgtgtatctatgccc
gactttgacgtcgacttttgtatggatagacgtgatgaagttattgaccacgtagctgag
ctatatggccgtgatgcggtatcgcaaattatcacctttggtaccatggctgcaaaagcg
gttgtgcgtgacgtgggcagggtgcttgggcatccttatggttttgttgatcgcttaact
aaaatgatcccagcagagcctgggatgacacttgccaaagcctttgaggttgaaccatca
ctgcctgaagcttatgacgcagatgaagatgtgcgcgagcttatcgacatgtgtcgccgc
ctcgaaggtgtgacacgtaatgcgggtaaacacgcaggtggcgtggttatttcaccgacc
accattaccgattttgcgccgctttattgcgacagtgaagggttaaatccagttactcag
tttgataaaaacgacgtagaaacagcgggactggttaagtttgacttcttagggttacgt
acacttaccattatcgactgggcgctgcagatgattaacccgcgcctagcgcgtgaaggg
aaagagccggtccgcattgaggcgattccactggacgatctcaaatcattcagactgctg
caacgttatgaaactacagcggtgttccagctggaatctcgcggtatgaaagatctgatt
aaacgcctgcagccagattgctttgaagacatgatcgcactggtagcgctgttccgccca
gggccactgcagtcgggcatggtagataactttattgaacgtaaacacggccgtgaagaa
gtatcgtatccagatcagcaatatcagcatgagtgtctaaaagagctgttgtcgccaact
tacggtattatcttgtatcaagagcaggtgatgcagatcgctcaggttatggcaggctac
accctaggtggcgcggacatgttgcgtcgcgctatgggtaagaaaaagccagaagaaatg
gctaagcagcgcggtacctttaaagagggcgcgatcaataacaatattgatggcgaactg
tcgatgaaaatcttcgacctggtagagaaattcgcaggttatggtttcaacaagtcgcat
tcggcggcgtacgcactggtttcataccaaaccttgtggttgaaaactcacttcccagct
gagtttatggcggcggtaatgtctgccgatatggataacaccgacaagattgttacccta
gtcgatgaatgtgagcgtatgggcttaccgcttattccacctgatgtgaacaaaggctta
ttcaagtttaccgttgatgatgaacagaacattgtttatggcatcggcgcgattaaaggc
gtaggtgaaggtccggttgactctatccttgaagcacgcaaagacggtccatttaaagac
ctatttgatttttgtgcccgcattgatcttaaaaagcttaacaagcgcgtgattgaaaaa
ctgattgccgctggcgcccttgatagtttaggtccgcaccgcgctgcaatgcatgcaact
ctgccagaggcaataagcgccgcagcgcaacatgcaaaagctgagtctattggtcaaagt
gatatgtttggcctactgaacgacacgccagaggattctaagcagcagtttgttgagtgc
acgccgtggcctgacaaggtttggttagaaggtgagcgcgagaccctaggcttgtattta
accggccatccaattaatcagtatcttaaagagttaaggcagtacacttctgggcgcctt
aaagatgcgcacccgacaggtcgcggtaaaaccattaaggttgctggtctggttgtgggt
acacgtgtgatggtgactaaacgtggctcaaaaatggggctagtgacgcttgatgataaa
agtgctcgccttgaagtgatgttattcaccgaagcgtttgagaagttcggtcatctgcta
gaaaaagataaaatcttgatctgtgagggtgaagtcgccgttgatgacttctctggtggc
aatcgcatgaacgcgcgcaatattatcgagattggcgaagcccgcagtcactttgcaaaa
gccgttgaaatcaacctgcaagcagagcaagtcaccccaaagtggttaaccgactttgaa
caaaccctcacaccttggcgtggcggcgccgtgccggtagtgatcacttactctcaaaat
agtgctcaggggcaattgcagttaggcgagcaatggcgagttaacccaactgacgagtta
atgctagatttagaaactctggtaggctccgcgaacgttaaaatttcctttaactag
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