Shewanella maritima: EXU30_17645
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Entry
EXU30_17645 CDS
T06365
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smai01002
]
EXU30_17645
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smai01011
]
EXU30_17645
Peptidases and inhibitors [BR:
smai01002
]
Cysteine peptidases
Family C82
EXU30_17645
Peptidoglycan biosynthesis and degradation proteins [BR:
smai01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EXU30_17645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QBF84292
UniProt:
A0A411PL89
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All DBs
Position
4163309..4164856
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AA seq
515 aa
AA seq
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MKRFVVSLFTAFSFGLTSFCVRLYPRSNLQSQLVANRLIAQVNARASGLKCALTVLFAAL
AIGLGFASSVNAQSLSERSLTQHVQLLQLAYPSARRAHYLDILQGQSYADKLEFQDEIIN
DIVSFWSERQVSLPYHQLNFHHVPSTQVIAMAVEPQVEDYLAVQNAIRKLLWLQQQSSWA
AIEPGGLLRQGDSHKTIKAITQRLQLLGDLVTEIEAESVYSTELMLGVQQFQARHGLKTD
GVIGPKTLYWLNRTPYQKAQLLAQSFIEKTIYLASIGDRYLLVNIPAYKLHLVDNNQLVL
TSRVIVGKAYRQTPVFQGEISNIVINPTWTVPRKLLRRDLLPKIRKDGNYVVDEQFDVYD
YSGNRVAKEAEQWQQEASGRFPYRLVQRPGKHNALGRYKIHFQNDLNVYLHDTPTPELFN
EPQRALSSGCVRVESIQELANWFADNLVEDQRTWQRLQSDYETTQWFSLKQKLPVHFVYW
PAWVNDQQVVQYRDDIYRKLVTPVPTKIAQNSLAR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatttgttgtttcattatttacagcgttttcgttcggccttacgtccttttgt
gtcaggttatacccccgctcaaatcttcaaagtcaattggttgctaataggttgattgct
caagtgaatgctagggcatctgggctaaaatgcgccttaacggttttgttcgcggcctta
gcgattggcttaggtttcgcttcgtcagttaatgcgcagtcattaagcgagcgtagcttg
acgcaacatgtgcaattactgcagctagcatacccaagcgccaggcgcgcgcattatctt
gatatacttcaaggtcagtcctatgccgataagcttgagtttcaagatgagattattaac
gacatagtgagtttttggtctgagcgtcaggtgagcctgccttatcatcagcttaatttt
catcatgtgccgtcaactcaggttatcgccatggcagttgagccgcaggtagaagattat
ctcgccgtgcaaaacgcaattcgtaaactattgtggctacaacaacagtctagttgggca
gcaattgagccaggtggattgcttaggcaaggagatagccataaaaccatcaaggcgatt
actcaaaggctgcaattgttgggtgacttagttactgagatagaagctgagtctgtttac
agcacagagttgatgcttggcgtgcagcaatttcaagcgcgccacggtttgaaaacagat
ggggtgattggccctaaaaccttgtactggctcaatcgaacgccttatcaaaaggcgcag
cttcttgcacaaagctttatagaaaaaactatttaccttgccagcattggtgatagatat
ttactggtcaatattcctgcttataagctacacctagttgataacaaccagctagtgcta
acttcaagagtcattgtgggtaaagcctaccgacaaacgcctgtatttcagggtgagatt
tctaatatagtcattaatccgacctggacagtgccgcgaaaactactgcgccgtgattta
ttgccaaaaatcagaaaagacggcaattatgtggttgatgagcagttcgatgtttacgat
tactcaggcaaccgagttgctaaagaagctgagcagtggcaacaggaggcctctgggcgt
tttccttatcgattagtgcagcgccccggtaaacacaatgcgctgggacgttataaaatc
cactttcaaaatgatctaaacgtgtatctacatgatacgccaacacctgagttgtttaat
gagcctcaacgcgcgttatcatcaggttgtgtgcgggttgagtcgatacaagagcttgcc
aattggtttgctgataacctggttgaagaccaacgcacctggcagcggttacagtcagat
tatgagactactcaatggttctcgctcaaacaaaaactaccagtccattttgtttattgg
ccagcctgggttaatgaccagcaagtggtgcaatatcgcgatgacatctatcgtaagctg
gtgacgcctgtacccacaaaaattgcacaaaatagccttgcgcgctaa
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