Shewanella maritima: EXU30_18375
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Entry
EXU30_18375 CDS
T06365
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_18375
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
EXU30_18375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA
AAA_22
SLFN-g3_helicase
AAA_16
Cas3-like_C_2
T1R_D3-like
zf-tcix
SNF2-rel_dom
DUF3638
CobA_CobO_BtuR
DZR
DUF3530
TerY_C
Motif
Other DBs
NCBI-ProteinID:
QBF84971
UniProt:
A0A411PNA3
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Position
complement(4321976..4323775)
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AA seq
599 aa
AA seq
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MKLRDYQQQSVDAAIRHFKQSQQSAVIVLPTGAGKSIVVAELARIANGNVLVLTHVKELV
EQNAEKVGLLTDKASIYSAGLKQKKASGKTVVASVQSAARAIEKFDQAFSLVIIDECHRV
SNDDTSQYQTLLSVLRDKNPNIKLLGLTATPYRLGIGWIYRTHYHGKVGNSDNPVFEKCI
FELPMRPLIKQGFLTQPKLLDGLSAQYDFNELTPSETGEYPAQQVDSLLNHQGRATTAIT
KQIIDLARTRQGVIVFAATVRHAQEIMALLEKFAPENTNDSAALITANTPHSERDDIIIR
FKAREIKFIVNVAVLTTGFDAPHVDFIAILRPTASVSLFQQMVGRGLRLSDNKEDCLVID
YAANGYDLFFPEVGQVKPNSRSVPVQVHCPVCQFANTFWGIVDGDGDLVEHFGRRCQGLV
EAETFDGNLDRLSDEVNSDKQMQCDFRFRSKSCPDCGAENDIAARVCHCCDSTLIDPDKR
LKQVLQSQHHHLFKCQQMLFSEQDDKLIIQYLDIEGNDFKRYYRFDTSAQRKAFYATFVL
EHTKTPGILHPQYNSISAVINDSERFRMPDMLLLKKNKHRWDLVESFFDYQGRHKTDFS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
attaaacttcgtgattaccagcagcaatcagttgatgctgccattcgccatttcaaacaa
agccagcaatccgccgtaatcgtactgccaactggtgcaggtaaaagtatcgtggtggcg
gagttagcacgtattgccaatggcaatgtgttggtattgacccatgtaaaggaactcgtt
gagcagaacgctgaaaaagtcggattactgaccgacaaagccagcatttattccgcaggc
ctaaagcaaaagaaggccagcggcaaaactgtggtcgccagcgtgcaatccgctgccaga
gcgattgaaaaatttgatcaagctttctcgctggtaattattgatgagtgccatagggtg
tcgaatgacgacaccagtcaataccaaacactgcttagcgtgctgagagacaaaaatccc
aacatcaagctactcgggctgaccgcgacgccctatcgtttaggtatcggctggatttat
cgtactcactatcacggtaaagttggcaatagcgataacccagtatttgaaaagtgcata
tttgaactgcctatgcgaccgctgatcaaacaaggctttttaactcagccaaaactgctt
gatggcttaagcgctcaatatgactttaatgagcttacgccaagcgaaaccggtgaatac
cccgcgcagcaagtagactcgctactgaatcaccaaggccgtgcaaccacagcaattacc
aagcaaattatcgaccttgcccgcacaagacaaggcgtgattgtattcgcggcaaccgtg
agacacgcacaagaaatcatggcgttacttgaaaagtttgcgccagaaaatacaaatgac
tctgcagcgcttattacagctaacaccccgcatagtgaacgtgacgacattatcattcgc
tttaaagctagggagataaaattcatcgtaaacgtagcagtattaaccacaggctttgat
gcgcctcatgtcgactttatcgcgattctcagaccaacggcgtcggtgagcttgtttcaa
caaatggttggtcgcggcttgcgcttaagcgacaacaaagaggactgtttggtcattgat
tacgccgctaatggttacgacttgttctttcctgaagtaggtcaagttaaacccaacagt
aggtcagttccagtgcaagtccactgccctgtgtgccagtttgcaaataccttttggggc
atagtcgatggtgacggcgatttagtcgaacactttggtaggcgttgtcaggggttagtt
gaagcagaaactttcgatggtaatcttgatcgactaagtgacgaggtcaatagtgataaa
caaatgcaatgcgactttcgctttcgctccaagtcttgccctgattgcggcgcagaaaac
gatattgccgccagagtgtgtcattgctgcgactcgaccttaatcgacccagacaaacgc
ctaaagcaggtactgcaatctcagcatcaccaccttttcaaatgccagcaaatgctgttt
agcgagcaagatgacaagcttattattcaatacctagacatagagggtaacgactttaaa
cgttactaccgctttgacaccagcgctcagcgcaaagcgttttacgccacctttgtgtta
gagcacacaaaaacgccggggatacttcaccctcagtacaattcgattagcgcggtaatt
aatgacagcgagcgttttcgcatgcctgacatgctactacttaagaaaaacaagcaccgc
tgggatctcgttgaaagcttctttgactatcaaggccgacacaaaactgactttagctaa
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