Shewanella maritima: EXU30_18900
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Entry
EXU30_18900 CDS
T06365
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smai
Shewanella maritima
Pathway
smai00061
Fatty acid biosynthesis
smai00071
Fatty acid degradation
smai01100
Metabolic pathways
smai01212
Fatty acid metabolism
smai02024
Quorum sensing
smai04146
Peroxisome
Module
smai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EXU30_18900 (fadD)
00071 Fatty acid degradation
EXU30_18900 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EXU30_18900 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXU30_18900 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smai01004
]
EXU30_18900 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smai04147
]
EXU30_18900 (fadD)
Enzymes [BR:
smai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EXU30_18900 (fadD)
Lipid biosynthesis proteins [BR:
smai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EXU30_18900 (fadD)
Exosome [BR:
smai04147
]
Exosomal proteins
Exosomal proteins of breast milk
EXU30_18900 (fadD)
Exosomal proteins of breast cancer cells
EXU30_18900 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBF84501
UniProt:
A0A411PLY3
LinkDB
All DBs
Position
4448296..4449969
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINHLPADVPAEINPDQFTSLVDMFEQAVNKYADTPAFINMGAKMTYRKLEERSRA
FAAYLQNELGLEKGDRVALMMPNLMQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLVDS
GAKAIVVVSNFARTLEEVVDQTPVQSVIITGLGDQLSAPKRTLVNFVVKYIKKMVPKYHL
PHARSFRDSLSKGRRQQYIKPEITNDDLAFLQYTGGTTGVSKGAMLTHRSVVANVLQANG
AYAPALQDGKELVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPAFVADLKKYPF
TALTGVNTLFNALVNDADFKALDFSKLKLSIGGGMAVQKAVADKWQSITQTRLLEGYGLT
EASPLVTCCPYDLDGYNGSIGFPAPSTLIQVRSEEGEVLPQGEVGELFAKGPQVMRGYWQ
RPEESSKVIDENGWLATGDIGYMDEKGFFYIVDRKKDMILVSGFNVFPNEVEDVVALHPK
VIEVAAVGVPHDVSGELVKIFVVAKDKSVTEKDLIKHCREHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEASNA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaatcacttacctgctgacgtgccagcagaaattaaccctgac
caatttacctcgcttgtggacatgtttgagcaagctgtcaacaagtatgcagatacacca
gcgttcataaacatgggcgcaaagatgacctaccgtaagcttgaagagcgcagccgcgcc
tttgcggcgtacttgcaaaatgagttaggtctagaaaagggcgatcgcgttgcgttaatg
atgcctaacctgatgcaatatcctattgcgctttttggagtactacgtgcaggtatggtt
gtggttaacgtgaatccactatataccccacgagagcttaaacatcagctggtggactct
ggcgctaaggccattgtcgttgtgtctaactttgcgcgtacccttgaagaagtggttgac
caaacacctgtgcagtcagtcattattactggtcttggcgatcagctaagcgcgcctaaa
cgcacattagttaactttgtcgttaagtacatcaagaagatggtgcctaagtatcactta
cctcatgctcgctcatttagagatagtctgtcgaaaggtcgccgccaacagtatatcaag
cctgaaatcactaacgatgatttagcattcttacaatatacaggtggcacaactggtgta
tcaaaaggggcaatgttgactcaccgcagcgtggtagccaatgtgctgcaagcaaatggt
gcttatgcgccagcgttgcaagatggcaaagagctagtggttaccgcattgccgctatat
catattttcgcgctgacagttaactgcttattgttcctgcataaaggcagtcaaaactta
ttaatcactaacccgcgtgatattccagcctttgttgctgatttaaagaaatacccattt
actgcgcttacgggtgtgaacaccttgttcaacgcactagttaacgatgctgactttaaa
gcgttagatttttctaagctaaaactgtcaatcggcggcggtatggcagtgcaaaaagcg
gttgctgataaatggcaaagcattacccagactcgtttgcttgaaggttatggtttaacc
gaagcatcgccgctagtgacctgctgcccgtacgacctagacggttacaacggttcaatc
ggtttccccgcgccatcaactcttatccaggtgcgaagcgaagaaggtgaagtactcccg
caaggtgaagtgggggagctatttgctaaaggcccgcaggttatgcgcggttactggcag
cgtcctgaagaaagcagcaaggtaatcgatgaaaatggctggttagctactggtgacatt
ggctacatggatgaaaaaggcttcttctacattgttgaccgtaagaaagacatgatttta
gtctctggctttaacgtattcccaaatgaagtggaagatgtcgtcgctctgcaccctaaa
gtgattgaggttgcagctgtaggtgtacctcacgatgtcagtggtgagctagttaaaatt
ttcgtggtagccaaagataagtccgtgactgaaaaagatttgattaagcattgccgcgaa
catttaacaggatataaagtaccaaaactggtagaatttagagacgagctgcccaaaacc
aatgtgggtaaaattttacgcagagagttaagagacgaggcgagcaacgcttaa
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