Shewanella maritima: EXU30_19240
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Entry
EXU30_19240 CDS
T06365
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
smai
Shewanella maritima
Pathway
smai03030
DNA replication
smai03430
Mismatch repair
smai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU30_19240 (holB)
03430 Mismatch repair
EXU30_19240 (holB)
03440 Homologous recombination
EXU30_19240 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smai03032
]
EXU30_19240 (holB)
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_19240 (holB)
Enzymes [BR:
smai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU30_19240 (holB)
DNA replication proteins [BR:
smai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU30_19240 (holB)
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU30_19240 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
QueC
Sigma_1s
Motif
Other DBs
NCBI-ProteinID:
QBF84985
UniProt:
A0A411PN92
LinkDB
All DBs
Position
4520373..4521287
Genome browser
AA seq
304 aa
AA seq
DB search
MTQQFYRQVVDEHYSHAYMLNADKAYGGELQASVMAQAVLCYNPSEQGACGHCKSCQLIA
AGSHPDLHLVAPDGHQIKVDQIRQLCSSLSQTAQQGGRRVAVIHQAERLNLAAANALLKT
LEEPGQETLIILQVNHGAQLLATIKSRCQALEFTRPNKAQLLSWLGALNIQLPLDKNDKP
QDVTWCIGILGGPIALVDSLANGRYQQLLAYRQDWALAAKQGYVSGELSKVSEEQIIDAL
NVFYLYLRQYVLKNTKTSPFIQAKIISLAGEVMQMCQRLSSMPNVNTTALCQQYIISFRQ
LILS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagttttatcgacaagttgttgatgagcactacagtcatgcatacatgctt
aatgccgataaggcttatggcggtgaattgcaggccagtgtgatggcgcaagctgtactt
tgctataacccaagtgaacaaggcgcttgtggtcattgtaagagctgtcaattgattgct
gctggctcacaccctgatctacaccttgtggcacctgatgggcatcagattaaagtcgat
caaattcgtcagctttgtagcagtctcagccaaacggctcagcagggtgggcgacgtgtt
gccgttattcatcaagcagaaagacttaaccttgccgcggcaaatgcgctgttgaaaaca
ttagaagagccaggtcaagagaccttgattattttgcaagtgaatcatggtgctcagttg
ctggcaaccattaagagtcgttgtcaggctctagagtttacccgccccaataaagcacag
ctgttgtcctggttaggggcattgaatattcagctaccgctagataaaaacgataaacct
caagatgttacctggtgtattggcattctcggtggtccaattgctttggttgacagttta
gctaacggacgctatcaacaattacttgcctaccgacaggattgggcacttgccgctaaa
caaggctatgtgagtggggaacttagcaaggtaagtgaggagcaaataattgatgctctt
aatgttttttatttgtacttacgccaatatgtgttaaaaaataccaagacatcacctttt
attcaggctaaaattatttcacttgcaggtgaggtgatgcagatgtgtcaacgcttgtcg
agtatgccaaacgtcaatacgacggctttatgtcagcagtacatcatttcttttaggcaa
ctaattttgtcttag
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