Shewanella maritima: EXU30_20065
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Entry
EXU30_20065 CDS
T06365
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smai
Shewanella maritima
Pathway
smai03030
DNA replication
smai03430
Mismatch repair
smai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU30_20065
03430 Mismatch repair
EXU30_20065
03440 Homologous recombination
EXU30_20065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smai03032
]
EXU30_20065
03400 DNA repair and recombination proteins [BR:
smai03400
]
EXU30_20065
Enzymes [BR:
smai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU30_20065
DNA replication proteins [BR:
smai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU30_20065
DNA repair and recombination proteins [BR:
smai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU30_20065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QBF84709
UniProt:
A0A411PMH8
LinkDB
All DBs
Position
4690595..4691323
Genome browser
AA seq
242 aa
AA seq
DB search
MNIVSSAPRQIILDTETTGMNQAGGPVYIGHRIIEIGCVEVINRKLTGRTYHQYINPGML
IDEEAIEVHGITNERVASEPRFHEIAKDFIDFIDGAEIVAHNAPFDISFMDHEFSMLQPT
GPVTANICQILDSLEVAKHLHPGQKNNLDALCKRYGIDNSRRTYHGALLDAEILADVYLI
MTGGQIKFNLSADEANQEDGGFAKIDTSGLNLKVISASADELVSHEQRLDLVAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtttctagtgccccacggcaaattattctcgatactgaaacaacgggtatg
aaccaagctggtggcccggtttatatcggtcacagaattattgaaatcggttgtgttgaa
gttatcaaccgtaaattaactggacgaacttatcaccagtatattaatccgggtatgttg
attgatgaagaggcgattgaagtacacggtatcactaatgagcgcgtcgcctcagagcca
aggtttcatgaaatagcgaaagactttatcgattttattgatggcgccgaaatcgtggca
cataacgcaccgttcgatattagctttatggatcatgaatttagtatgctgcagccaact
gggcctgtcaccgctaatatctgtcaaattctcgatagccttgaagttgccaagcatctg
catccaggacaaaagaataaccttgacgccttatgtaagcgttacggcatagacaatagt
cgtcgtacttaccatggcgcgttactcgatgccgagatcttagccgatgtttacctgatc
atgacaggtgggcaaatcaagttcaatttgtctgccgatgaagccaaccaagaagatggt
ggcttcgcaaaaattgatactagcggattaaatcttaaagtgatctccgcatctgccgat
gaattagtatcacacgaacaaagacttgatttagtagcaaagtctggcaaatgtctctgg
cgaggataa
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