Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_1488
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Entry
SMALA_1488 CDS
T05189
Name
(GenBank) type IV secretory pathway VirD4 protein-like protein
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF8128
TrwB_AAD_bind
DUF87
TraG-D_C
T4SS-DNA_transf
AAA_22
ABC_tran
FtsK_SpoIIIE
AAA_29
nSTAND3
DEAD
PWD_link
AAA_16
Mg_chelatase
AAA_10
NACHT
cobW
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ATL81722
LinkDB
All DBs
Position
2023187..2025307
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AA seq
706 aa
AA seq
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MWAQLAGLLRPWWRRFADGQPHLGFEYAWSPTGLGIRLWVPGTVPLGLVRRAVEAAWPGA
HTRVQRPPELIPPGHVVTAGRLRPARPEVLPLRTEHAADPLRAVLQAATGMSEGETALVQ
ILVRPATGAAVRRARRSARRLKAGGPAPRLPALGALLLHRPQPVLARRQDVEHGVAVRQS
AAKLTGPQWHTSITYAATCTRQEERARDVVRGRAHALASAFGLYAELNWLARTRLAHPER
WLERRVFPQRASLLSVPELAALAHLPLDADAPGLRRAGARSVLPPPTVPEPTPGAGVKPL
GHSDTGARRPVGLAVADARHHIHLMGATGSGKSTLVAHLVLDDVRNYRGAIVIDPKGDLV
SDLLHRLPDTCADRLVLIDPDDSHAPPCLNVLDGADIDVVVDNLTGIFRRIFTAFWGPRT
DDVMRAACLTLLKHRAHTGQLVTLADVPRLLGEPAYRLRLIPTIKDPVLRGFWAWYESMS
EPSRAAVVGPVMNKLRAFLLRDFARRAISAGPSTFDLTQVLDGGILLARLPKGALGEETA
RLLGSFIVAGTWQAASARARTPEHQRIDASLYVDEAHNFLTLPYPLEDMLAEARGYRLSM
ALAHQHLAQLPRDLREGISANARNKIFFNASPEDASALERHTLPTLTAHDLAHLGPYQAA
AHLLTAGAESPAFTLTTRPLPPPVPGRATDLRTAAAARAHTRATRP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggcgcagctggcgggtttgctgcggccgtggtggcgacgctttgccgatggccag
ccgcatctggggttcgagtacgcgtggtcgccgacggggctggggatccggttgtgggtg
ccggggacggtgcctctggggctggtgcggcgggcggtggaggcggcctggcccggcgcc
cacacccgcgtccaacgaccaccggagctcatcccgcctggccatgtggtgacggcgggg
cggttgcgcccggcccggccggaggtgctgccgctgcgcaccgagcacgcggctgacccg
ctccgggccgtgttgcaggcggccaccggtatgagcgagggcgagaccgcgctcgtgcag
atcctcgtccgcccggcaaccggcgccgctgtgcggcgggcccgccggtcggcgcggcgg
ttgaaggccggaggcccggcccctcggctgcccgcgctcggcgcgctcctgctgcaccgg
ccgcagccagtactggcccggcggcaggatgtcgagcacggtgttgcggtccgtcagtcc
gccgcgaaactcacaggcccgcaatggcacacgtccatcacctacgccgccacctgcaca
cgccaggaggagcgtgcgcgggatgtggtgcgagggcgtgcgcacgcgctcgcctccgcg
ttcggcctgtacgcggaactcaactggctcgcccgcacccgactcgcccaccccgaacga
tggctggaacgacgcgtcttcccacagcgtgcatcgctgctgtcggtcccggaactggcg
gccctggcccatctgcccctcgacgcggacgcccccggcctgcggcgcgcgggagcacgc
tcagtcctcccaccccccacagtccccgagcccacccccggcgccggggtcaagccgctg
ggccactccgacaccggcgcccgccgcccggtcggtctcgcggtcgcggacgcccgccac
cacatccatctgatgggcgccaccggctccggcaaatccaccctggtcgcccacctcgtc
ctcgacgatgtccgcaattaccggggcgcgatcgtcatcgatcccaagggcgatctcgtc
agcgacctcctgcaccgcctgcccgacacctgcgccgaccgcctggtcctcatcgacccc
gatgactcccacgccccgccatgcctgaacgtcctggacggggccgacatcgacgtggtc
gtcgacaacctcaccggcatcttccgccgcatcttcaccgccttctggggccccaggacc
gacgacgtcatgcgagcggcctgcctgaccctgctcaaacaccgcgcccacacaggtcag
ctcgtcaccctcgccgacgtcccccgcctcctgggcgaacccgcctaccgcctgcgcctg
atccccaccatcaaagaccccgtcctccgcggcttctgggcctggtacgagtccatgtcc
gaaccctcccgcgccgccgtcgtcggcccggtgatgaacaagctgcgcgccttcctgctg
cgcgacttcgcccgccgcgccatctccgccggcccctccaccttcgacctcacccaagtc
ctcgacggcggcatcctcctcgcccgcctccccaaaggcgcactcggcgaggagaccgcc
cggctgctgggctccttcatcgtcgccggaacctggcaagcggcctcagcccgcgcccgc
acccccgaacaccagcgcatcgacgcgtccctgtacgtggacgaggcgcacaacttcctc
accctgccctaccccctggaggacatgctcgccgaagcccgcggctaccggctgtccatg
gccctggcccaccagcacctcgcccagctcccacgcgacctgcgcgaaggcatctccgcc
aacgcccgcaacaagatcttcttcaacgcatcccccgaagacgcttcggccctggaacgc
cacaccctccccaccctcaccgcccacgacctcgcccacctcggcccctaccaagccgcc
gcccacctgctcaccgccggcgccgaatccccggccttcaccctcaccacccggcccctc
ccaccccccgtccccggccgcgccaccgatctccgcaccgccgcagcggcccgcgcacac
acccgggccacccgcccctga
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