Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_1618
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Entry
SMALA_1618 CDS
T05189
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Pathway
smal00900
Terpenoid backbone biosynthesis
smal00997
Biosynthesis of various other secondary metabolites
smal01100
Metabolic pathways
smal01110
Biosynthesis of secondary metabolites
Module
smal_M00364
C10-C20 isoprenoid biosynthesis, bacteria
smal_M00921
Cyclooctatin biosynthesis, dimethylallyl-PP + isopentenyl-PP => cyclooctatin
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SMALA_1618
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
SMALA_1618
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smal01006
]
SMALA_1618
Enzymes [BR:
smal01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SMALA_1618
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SMALA_1618
2.5.1.29 geranylgeranyl diphosphate synthase
SMALA_1618
Prenyltransferases [BR:
smal01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SMALA_1618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
U3snoRNP10
Motif
Other DBs
NCBI-ProteinID:
ATL81852
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All DBs
Position
2180619..2181692
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AA seq
357 aa
AA seq
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MTAHVMATPRPASAPATSARRTLMSLLPRVEERLHAFLSKEYERWHALDPRWSVPIDGIA
DLVNAGGKRMRPTFCLSGYLASGGDPQDQRVVPVAAALELLHACALIHDDVMDESPVRRG
APTVHTGQAALHRERGWRGAAERYGENVAILAGDLALVYSDEIMAEVEPAVAAEWHLLRS
ELIIGQYMDVAASVEFEPDPETSRWIAIAKSGRYTIHRPLVLGAAVAGRPDAAPAFEEYG
AALGEAFQLRDDLLDAFGDSEVTGKPSGQDFEQHKMTLLMALAIQRNAHIRELVPARLRS
ADHLRELLVETGVRDDVEKHIDGLVERACRAIGAAPLEPEWREELAAMAHEVAYRNA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcccatgtgatggcgaccccccgccccgcctcggccccggccacctccgcccgc
cggacgctgatgagcctgctgccccgggtcgaggagcggctgcacgccttcctgtccaag
gagtacgagcggtggcatgcgctggacccgcgctggagcgtgcccatcgacggcatcgcc
gacctggtcaacgcgggcggcaagcgcatgcgcccgacgttctgcctgagcggctatctg
gcctccggcggcgatccgcaggaccagcgcgtcgttcccgtcgccgccgcgctggagctg
ctccacgcctgtgcgctgatccacgacgatgtgatggacgagtccccggtgcgccgcggc
gcgccgaccgtgcacaccggccaggccgcgctgcatcgcgagcgcggatggcggggcgcg
gcggagcgctacggggagaacgtcgcgatcctcgcgggcgatctggccctggtctactcc
gacgagatcatggccgaggtggagcccgcggtcgccgccgagtggcatctgctgcgctcg
gagctgatcatcggccagtacatggacgtcgcggcgtccgtggagttcgagccggacccg
gagacctcgcggtggatcgccatcgccaagtccggccgctacaccatccaccgcccgctg
gtcctgggcgccgcggtggccggccgtcccgacgcggcaccggccttcgaggagtacggg
gccgcgctcggtgaggcgttccagctgcgcgacgacctcctggacgccttcggggactcg
gaggtcaccggcaagcccagtggccaggacttcgagcagcacaagatgacgctgctgatg
gccctggccatccagcgcaacgcgcatatccgggagctggtgcccgcccggctgcggagc
gccgaccacctgcgggagctgctggtcgagacgggcgtgcgggacgacgtcgagaagcac
atcgacgggctcgtcgagcgggcctgccgcgccatcggcgccgctccgctggagccggag
tggcgggaggaactggccgccatggcccatgaggtcgcctaccggaacgcctga
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