Streptomyces malaysiensis DSM 4137: SMALA_1929
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Entry
SMALA_1929 CDS
T05189
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Pathway
smal03030
DNA replication
smal03410
Base excision repair
smal03420
Nucleotide excision repair
smal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMALA_1929
03410 Base excision repair
SMALA_1929
03420 Nucleotide excision repair
SMALA_1929
03440 Homologous recombination
SMALA_1929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smal03032
]
SMALA_1929
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_1929
Enzymes [BR:
smal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMALA_1929
DNA replication proteins [BR:
smal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SMALA_1929
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SMALA_1929
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMALA_1929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Imm50
HHH_2
NYN_YacP
TraI_hel_assoc_N
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
ATL82163
LinkDB
All DBs
Position
complement(2544995..2547730)
Genome browser
AA seq
911 aa
AA seq
DB search
MAEKASKKTAAPAPDRTGEDRPRLLLLDGHSLAYRAFFALPAENFSTTTGQTTNAIYGFT
SMLANTLRDERPTHLAVAFDVSRKTWRSEQFTEYKANRSKAPDEFKGQVELIGELLDAMK
ITRFAIDGFEADDVIATLATQAEEQGFEVLIVTGDRDSFQLITEHVTVLYPTKGVSELTR
FTPEKVQEKYGLTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFKELVERVD
EVKGKVGEKLRDHLEAVKLNRQLTELVRDVELTAGPEGLERAPYDREALSVILDALEFRH
QNFRDRIMAVDPGAAADEPVAAEPGVAVEAVALGAGELAPWLESHRDTPLGLATVDTWAL
GSGSVSEIALATGSGPAVCFDPAGLDEADERAFAEWIAGPDRPKVLHNAKGTMRVFAEHG
WSVAGVTMDTALAAYLVKPGRRSFELDALSVEYLGRELSPAAAADGQLAFGVDEEAERDA
LMIKARTILDLGEAFGGRLKDVGAAGLLHDMELPVSELLARMERSGIAADRGWLERMEQQ
FAAAVQHAVKEAHAAVGHEFNLGSPKQLQEVLFGELGLPKTKKTKTGYTTDADALAWLAA
QTDHELPVIMLRHREQARLRSTVEGLIKTVAPGGRIHTTFNQTVAATGRLSSTDPNLQNI
PVRTDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTVA
SQVFAVDKSAVDPEMRRKIKAMSYGLAYGLSAFGLSQQLGINPDEARKLMENFFERFGGV
RDYLQRVVEEARATGYTETMLGRRRYLPDLTSDNRQRREMAERMALNAPIQGTAADIVKI
AMLKVDAALTREKLSSRMLLQVHDEIVLEIAPGERERVEELVRREMTGAFQLSAPLDVSV
GSGADWESAAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagaaagcatcgaagaagaccgcagcgcccgcgcccgaccgcacgggggaggac
cgtccccgcctgctcctgctggacgggcattccctggcataccgggcattcttcgcgctg
ccggcggagaacttcagcacgaccaccggtcagaccaccaacgcgatctacggcttcacc
tcgatgctggcgaacacgctccgtgatgagcggcccacgcacctcgccgtggcgttcgac
gtctcgcgcaagacctggcgctccgagcagttcacggagtacaaggcgaatcgctccaag
gcccccgatgagttcaagggccaggtcgagctgatcggtgagctgctcgacgccatgaag
atcacgcgcttcgcgatcgacggcttcgaggccgacgacgtgatcgccaccctcgccacc
caggccgaggagcagggcttcgaggtgctgatcgtcaccggcgaccgggattccttccag
ctgatcaccgagcatgtcacggtgctctaccccaccaagggcgtctccgagctgacccgg
ttcacccccgagaaggtgcaggagaagtacggcctcaccccgagccagtaccccgacttc
gcggccctgcgcggcgatccgtcggacaacctccccggtatcccgggcgtcggcgagaag
accgcggcgaagtggatcaatcagttcggctccttcaaggagctggtggagcgggtcgac
gaggtcaaggggaaggtcggcgagaagctccgcgaccacttggaggccgtcaagctcaac
cgccagctgaccgagctggtgcgggacgtggagctcaccgcgggccccgaggggctcgag
cgcgcgccgtacgaccgcgaggcgctctcggtgatcctggacgccctggagttccgccac
cagaacttccgtgaccggatcatggccgtcgacccgggcgcggcggcggacgagcccgtg
gccgccgagccgggtgtcgccgtcgaggcagtggcgctgggcgcgggcgagctcgccccc
tggctggagagccaccgggacaccccgctgggcctggccaccgtcgacacctgggcgctg
ggcagtggcagcgtcagcgagatcgcgctggccaccggctcaggccccgccgtgtgcttc
gaccccgcggggctggacgaggccgacgagcgggcgttcgccgagtggatcgcgggcccg
gaccgccccaaggtgctgcacaacgccaaggggaccatgcgggtcttcgccgagcacggc
tggtccgtcgcgggcgtcaccatggacaccgccctcgccgcctatctggtcaagcccggc
cgccgctccttcgagctggacgccctgtcggtggagtacctgggccgtgagctctccccg
gcggcggccgcggacgggcagctggccttcggtgtcgatgaggaggccgagcgggacgcc
ctgatgatcaaggcgcggaccatcctcgacctgggcgaggcgttcggcggccggctgaag
gacgtgggcgcggccgggctgctgcacgacatggagctgcccgtctccgagctgctggcc
cggatggagcggtcgggcatcgccgccgaccgcggctggctggagcgcatggagcagcag
ttcgcggccgccgtgcagcacgccgtgaaggaggcccacgccgcggtgggccatgagttc
aacctcggctcccccaagcagctccaggaggtgctcttcggcgagctgggcctgcccaag
accaagaagaccaagaccgggtacaccacggacgccgacgcgctggcctggctggccgcg
cagaccgaccacgaactcccggtgatcatgctgcgccaccgtgagcaggcgcggctgcgc
tccaccgtcgagggtctgatcaagaccgtcgcccccggcggccgcatccacaccaccttc
aaccagaccgtggcggccaccggccggctctcctccaccgaccccaacctccagaacatc
ccggtgcgcacggacgaggggcgggcgatccggcgcggcttcgtcgtcggcgagggcttc
gagtcgctgatgaccgccgactacagccagatcgagctgcgcgtcatggcccatctctcc
gaggacgagggcctgatcgaggcgttcacctccggtgaggacctgcacaccacggtcgcc
tcccaggtcttcgccgtcgacaagtcggccgtcgacccggagatgcggcgcaagatcaag
gccatgtcctacgggctggcgtacggcctgtcggcgttcggcctctcccagcagctgggc
atcaaccccgatgaggcccgcaagctgatggagaacttcttcgagcggttcggcggggtg
cgcgactatctccagcgggttgtcgaggaggcgcgcgccaccggctatacggagaccatg
ctcggccgccgccgctatctgccggacctcaccagcgacaaccgccagcgccgtgagatg
gccgagcggatggcgctcaacgccccgatccagggcaccgccgccgatatcgtgaagatc
gcgatgctcaaggtggacgcggcgttgacgagggagaaactctcgtcccggatgctgttg
caggtccacgacgaaatcgtgctggagatcgcgcccggtgagcgggagcgggtcgaggag
ctggtgcgccgggagatgacgggggccttccaactcagcgctccgctggacgtatcggta
ggatccggtgccgactgggagtccgcggctcactga
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