Streptomyces malaysiensis: SMALA_2047
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Entry
SMALA_2047 CDS
T05189
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
smal
Streptomyces malaysiensis
Pathway
smal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMALA_2047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_2047
Enzymes [BR:
smal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SMALA_2047
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SMALA_2047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2749
Motif
Other DBs
NCBI-ProteinID:
ATL82281
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All DBs
Position
2682693..2683523
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AA seq
276 aa
AA seq
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MAGGLATVGLAHAADIGAETVQVFVANPRGWATPTGTPAQDEAFRAGCAERSIPVYVHAP
YLINFGSHTEATADRSVDSLRHSLRRGREIGALGVVVHTGSATGGRARATAIAQMRERML
PLLDELTRDDDPWLLLEPTAGQGTSLCALVEDLGPYAEALDRHPRLGVCLDTCHVFAAGH
DLAAPGGMKQTLDELVAVMGEGRLRLIHANDSKDVVGAHKDRHANIGAGHIGAEPFRELF
THSATDRVPLVIETPGGTEGHAADVARLKELRAGAA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggccggtggcctcgccaccgtcggtctggcgcacgccgccgacatcggcgccgagacc
gtccaggtctttgtcgccaatccgcgcggctgggccaccccgaccggcacgcccgcccag
gacgaggcgttccgcgccggctgcgccgagcggtccataccggtgtacgtccacgccccc
tacttgatcaacttcggctcgcacaccgaggccacggccgaccgctcggtcgactccctg
cgccattcgctccggcgcggccgggagatcggcgcgctcggcgtggtcgtccacaccggt
tcggcgaccgggggacgcgcgcgggccaccgcgatcgcgcagatgcgggagcggatgctg
ccgctgctcgacgagctgacccgggacgacgacccctggctgctgctggagccgaccgcc
gggcagggcacctcgctgtgcgcgctggtggaggacctgggcccgtacgccgaggcgctc
gaccggcacccccggctcggtgtctgcctggacacctgtcatgtgttcgcggcgggccat
gacctcgccgcgccgggcggtatgaagcagaccctggacgagctggtggccgtcatgggc
gaggggcggctcaggctgatccacgccaatgactccaaggacgtggtcggcgcccacaag
gaccggcacgcgaacatcggcgccgggcacatcggggcggagccgttccgcgagctgttc
acccactccgcgacggacagggtgccgctggtgatcgagacgccgggcggtacggagggg
catgcggcggatgtggcccggctgaaggagctgcgcgccggggcggcctga
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