KEGG   Streptomyces malaysiensis: SMALA_2404
Entry
SMALA_2404        CDS       T05189                                 
Name
(GenBank) pectate lyase A
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
smal  Streptomyces malaysiensis
Pathway
smal00040  Pentose and glucuronate interconversions
smal01100  Metabolic pathways
smal02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smal00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SMALA_2404
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMALA_2404
Enzymes [BR:smal01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     SMALA_2404
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-ProteinID: ATL82638
LinkDB
Position
complement(3082496..3083644)
AA seq 382 aa
MRSTHDHGTTDGFGDVPGVIRATSLTSTINATSETDALGISVAARRRRRLTAVAAGVTAA
LALGGLSTVSAHGADPADSAGSNSTRATATRPAAETTPIGFGAGTTGGGNATATTVTSLD
AFKTAVTGDKAKVVRVSGLISLTGQVDIGSNTTVLGVGSGSGFTGGGLRLKESTNVIVRN
LDISKPRKPSDGITVQKSTKVWIDHNTFSADREHDKDYYDGLLDINHGSDNITVSWNKFA
DHFKGSLVGHSDNNASEDTGHLKVTYHHNWFTNVYSRIPSLRFGTGHFYDNYVQGAETGV
HSRMGAQTLVENNVFRDTEVAVTTSRDSDVDGYAVLRGNDLGGAATEISRTGGFTTPPYA
YTAEPASSVVATVTAQSGAGRL
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgcgctcgacgcacgatcacggcaccacggacggcttcggcgatgtccccggagtcatc
cgcgcgaccagcctgaccagcacgatcaacgccaccagcgagaccgacgccctcggcata
tccgtcgccgcccgccgccgacgccgactgaccgcggtcgccgcgggcgtcaccgcggcg
ctcgcgctcggcggcctctccacggtctccgcccatggcgcggacccggccgactccgca
ggctccaacagcacacgcgccaccgccacccgccccgccgccgagaccacccccatcggc
ttcggcgccggcaccacgggcggcgggaacgccaccgccaccaccgtgacctccctggac
gccttcaagaccgccgtcacgggcgacaaggccaaggtggtcagggtctccgggctgatc
tccctcaccggacaggtggacatcggctccaacaccaccgtgctgggcgtgggttcgggc
tccggtttcaccggcggcggactgcggctgaaggagtcgacgaacgtcatcgtccgcaac
ctcgacatcagcaagccccggaagccgtccgacggcatcaccgtgcagaagtcgacaaag
gtgtggatcgaccacaacaccttctcggccgaccgcgagcacgacaaggactactacgac
ggtctgctggacatcaaccacggctcggacaacatcaccgtctcctggaacaagttcgcc
gaccacttcaagggcagcctggtcggccacagcgacaacaacgcgagcgaggacaccggg
cacctcaaggtgacgtaccaccacaactggttcaccaatgtgtactcccgcatccccagc
ctgcgcttcggcaccggacacttctacgacaactacgtccagggcgcggaaaccggagtg
cactcccggatgggcgcgcagacgctggtcgagaacaacgtcttccgcgacaccgaggtg
gccgtcaccaccagccgggacagcgatgtcgacggctatgcggtgctgcgcggcaacgac
ctgggcggggcggccaccgagatctcccggacgggcggcttcaccaccccgccgtacgcg
tacacggcggaaccggcgtcctcggtcgtggcgaccgtcaccgcccagtcgggcgcgggc
aggctctga

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