Streptomyces malaysiensis DSM 4137: SMALA_2560
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Entry
SMALA_2560 CDS
T05189
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smal03016
]
SMALA_2560
Enzymes [BR:
smal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SMALA_2560
Transfer RNA biogenesis [BR:
smal03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SMALA_2560
Prokaryotic type
SMALA_2560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
ATL82794
LinkDB
All DBs
Position
complement(3256612..3257532)
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AA seq
306 aa
AA seq
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MSARELIVLGTASQVPTRHRNHNGYLLRWDGEGLLFDPGEGTQRQMLMAGVAAHDIDRIC
VTHFHGDHSLGLAGVIQRINLDRVPHQVTAHYPASGQRFFERLRYATAYRETVALTEEPV
AGDGAMLARTSAYTLEAARLSHPVESYGYRLTEPDGRRMLPERLAALGIRGPQIGRLQRE
RVLEVEGRTVTIEEVSEVRRGQRFAFIMDTRLCDGADALAQGCDLLVIESTFLDEDEALA
VEYGHLTAGQAARVAAGAGVRHLVLTHFSQRYGDPTDFERQARAAGFEGELTVAQDLMTV
AVPKRR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgcacgggaactgatcgtcctcggcaccgcgagccaggtgccgacacggcaccgc
aaccacaacggctatctgctccgctgggacggtgagggcctgctgttcgaccccggcgag
ggcacccagcgccagatgctgatggccggggtcgccgcccatgacatcgaccggatctgt
gtcacgcacttccacggggaccactccctgggcctggccggggtgatccagcggatcaac
ctcgaccgggtgccgcaccaggtgaccgcccactacccggcgagcggacagcggttcttc
gagcggctgcggtacgcgaccgcctaccgcgagaccgtggcgctgaccgaggagccggtc
gccggtgacggtgcgatgctggcccgcacctccgcgtacaccctggaggcggcccggctc
tcgcaccccgtcgagtcctacggctaccgcctgaccgagccggacggccgcaggatgctg
cccgagcggctcgccgcgctcggcatccgcggcccgcagatcgggcggctccagcgggag
cgggtgctggaggtcgaggggcgtacggtcacgatcgaggaggtcagcgaggtgcgccgg
gggcagcgcttcgcgttcatcatggacacccggctgtgcgacggcgccgacgcgctggcg
caggggtgcgatctgctggtcatcgagtcgaccttcctggacgaggacgaggcgctggcc
gtcgagtacgggcatctgaccgcgggacaggcggcccgggtcgccgccggggcgggagtg
cggcatctggtgctgacgcacttctcgcagcgctacggcgatcccaccgacttcgagcgc
caggcgcgggccgccgggttcgagggggagctcacggtcgcccaggacctgatgacggtg
gcggtgcccaaacggcgctga
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