Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_2818
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Entry
SMALA_2818 CDS
T05189
Name
(GenBank) exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Pathway
smal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SMALA_2818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smal03019
]
SMALA_2818
03009 Ribosome biogenesis [BR:
smal03009
]
SMALA_2818
Messenger RNA biogenesis [BR:
smal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMALA_2818
Ribosome biogenesis [BR:
smal03009
]
Eukaryotic type
Pre-60S particles
RNases
SMALA_2818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATL83052
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All DBs
Position
3706913..3707521
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AA seq
202 aa
AA seq
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MNDRMVWIDCEMTGLSLANDALIEVAALVTDSELNILGDGVDIVVRPPAEALVTMVEVVR
DMHTASGLLAELEGGTTLEDAQDQVLGYIREHVPEAGKAPLCGNSVGTDRGFLLRDMPTL
ESYLHYRIVDVSSIKELARRWYPRAYFNSPKKNGNHRALADIHESIAELRYYREAIFVPA
PGPDSDTAKSIAAKHVLPARSA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccgggctctcgctggcgaacgac
gcgcttatcgaggtggccgcgctggtcacggactccgagctgaacatcctgggcgacgga
gtggacatcgttgtccggccccccgcggaagcgctggtcaccatggtcgaggtggtgcgc
gatatgcacaccgcctccggcctgctcgccgagctcgagggcgggacgacgctcgaggat
gcccaggaccaggtcctgggctacatccgcgagcacgtccccgaggccggcaaggccccg
ctgtgcggaaactcggtcggtaccgaccgtggcttcctcctgcgagacatgccgacgctc
gagagctacctccactaccggatcgtcgacgtctcctcgatcaaggagctggcccgccgc
tggtacccgcgggcctacttcaacagccccaagaagaacggcaatcaccgagcgctcgcg
gacatccacgagtccatcgccgagctgcgctactaccgggaagcgatcttcgtcccggcg
cccggcccggactcggacacggcgaagtcgatcgcggccaagcacgtcctgcccgcccgg
tccgcctga
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