Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_3058
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Entry
SMALA_3058 CDS
T05189
Name
(GenBank) penicillin binding protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Pathway
smal00550
Peptidoglycan biosynthesis
smal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMALA_3058
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smal01002
]
SMALA_3058
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smal01011
]
SMALA_3058
Enzymes [BR:
smal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SMALA_3058
Peptidases and inhibitors [BR:
smal01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SMALA_3058
Peptidoglycan biosynthesis and degradation proteins [BR:
smal01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SMALA_3058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
DDE_Tnp_1_2
6BHPP
Asp-Al_Ex
Motif
Other DBs
NCBI-ProteinID:
ATL83292
LinkDB
All DBs
Position
complement(3953957..3955564)
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AA seq
535 aa
AA seq
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MSRPLNRRAHGWIWPLVIPLVIGLAFTLTWSSPAGADAGADTSRAGIGDALDTILADPLL
KGGAAGVVVADADSGAVLYQHRPDDRLMPASNTKLFTSAAAMGLLGPGHRFRTDVLTDGS
RNGRVLRGDLYLRGTGDPTMLAADYDRLAKDVADAGITRVTGRLIADDTRFDAQRVGRSW
AADDESSYYAAQISALTLAPDTDYDAGSVIVEVAPGAAAGDRPKVTVTPPNAYVRIDNRA
TTGGGTLTVERQHGSNTITVSGALPAGAATVKEWVSVWAPTGYATSVFADALERHGVRVA
GPTRLGRAAPADARTLAAHRSMPLKELLIPFMKLSNNIHAEALTKAIGHETAGRGSWDAG
LAAIADWLKKRGVDTGAVRQVDGSGLSRMDNIAAGRLTELLLSVRDEPWYADWYASLPVA
CAPDRFVGGTLRTRMCSTPAAGNARGKTGSLTGASALSGYVTDADGRELVYSVVLNNYLA
SSVKNLEDAIVVTLAKSGEGHAEAVRPRAVRGDSATTAATADAGLECSWDKPRGC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacccctgaaccgtcgtgcgcacggctggatctggcccctcgtcatccccctc
gtcatcggactcgccttcaccctcacctggagctcaccggccggtgcggacgccggtgcg
gacacctcccgcgccgggatcggcgacgccctcgacaccatcctcgcggaccccctgctg
aagggcggcgcggccggggtggtggtcgccgacgccgactccggcgccgttctgtaccag
caccggcccgacgaccggctgatgcccgcctccaacaccaagctgttcacctcggccgcc
gccatggggctgctcggccccggccaccgcttccgcaccgatgtcctgaccgacggcagc
cgcaacggccgggtgctgcgcggcgatctgtatctgcgcggcaccggcgaccccacgatg
ctcgccgcggactacgaccgcttggcgaaggacgtcgccgacgcggggatcacccgggtc
accgggcggctgatcgccgatgacacccgcttcgacgcgcagcgggtgggccgctcctgg
gcggccgacgacgagtcgtcgtactacgcggcgcagatctccgcgctgaccctcgccccc
gacaccgactacgacgcgggcagcgtcatcgtggaggtggccccgggcgcggccgcgggc
gaccggccgaaggtcacggtgacgccgccgaacgcctatgtacggatcgacaaccgcgcg
accaccggcggcggcaccctcaccgtcgagcggcagcacggctccaacaccatcaccgtc
agcggcgccctcccggccggggcggcgaccgtcaaggaatgggtcagcgtctgggcgccc
accggctacgccacctcggtcttcgccgacgccctcgaacggcatggcgtccgcgtggcc
gggcccacccgcctgggccgggccgctccggcggacgcccggacgctcgccgcgcaccgc
tccatgccgctgaaggaactgctcatccccttcatgaagctgtccaacaacatccacgcc
gaggcgctcaccaaggccatcggccatgagacggccgggcgcggcagctgggacgcgggg
ctcgcggccatcgccgactggctgaagaagcggggcgtggacaccggcgcggtgcgccag
gtggacggctcggggctgtcccggatggacaacatcgcggccgggcgcctcaccgaactg
ctgctgtcggtgcgcgacgagccctggtacgccgactggtacgcctcgctgccggtggcc
tgcgccccggaccggttcgtgggcggcaccctgcgcacgcggatgtgctccaccccggcg
gccggcaacgcccgcggcaagaccggctccctgaccggcgcctccgcgctctccggctat
gtcacggacgcggacggcagggagctggtctacagcgtggtcctcaacaactacctcgcc
tcatcggtgaagaacctggaggacgcgatcgtggtgacgctcgcgaagtccggcgagggc
catgcggaggcggtgcggccccgggccgtacggggcgactcggccaccaccgccgccacg
gccgacgccggactcgaatgctcctgggacaagccccggggctgctaa
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