Streptomyces malaysiensis: SMALA_3170
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Entry
SMALA_3170 CDS
T05189
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smal03021
]
SMALA_3170
Transcription machinery [BR:
smal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMALA_3170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
HTH_3
HTH_Crp_2
DUF7343
HTH_10
MarR
Sigma70_ECF
HTH_37
GerE
Motif
Other DBs
NCBI-ProteinID:
ATL83404
LinkDB
All DBs
Position
4102964..4103722
Genome browser
AA seq
252 aa
AA seq
DB search
MDARALSKTLFERLQVLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVG
TIGLIKAIDRFETGRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGD
ELAQRLDRAPTVRELAERLDITQAEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGY
EDHGLEGIEYVESLKPLIADLPARDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRT
LRRLRKGLMIEE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcgagggctctgtcgaagaccctcttcgaacgtctccaggtgctggaggaaggc
acccacgagtacgcctatgtgcgtaacacgctggtcgagctcaacttggcgctggtcaag
ttcgccgcctcccggttccgctcccgcagcgagccgatggaggacatcgtccaggtcggc
accatcggcctgatcaaggccatcgaccgcttcgagacgggccggggcgtggagttcccg
accttcgcgatgccgacgatcgtcggtgagatcaaacgcttcttccgcgacaccagttgg
tcggtgcgcgtgccgaggcggcttcaggaactccgtctcgacctggccaaggccggcgac
gagctggcccagcggctcgaccgcgcccccaccgtccgcgagttggccgagcggctggac
atcacccaggccgaggtcgtcgagggcatggccgcgagcaacgcgtacaccgcgagctcg
ctggacgcccagccggaggaggacgactccgagggagcgctggccgaccggatcggatac
gaggaccacgggctcgaaggcatcgagtacgtcgagtccctgaagccgctgatcgccgat
ctgcccgcccgcgaccggaagatcctctccctgcgcttcgtggccaatatgacgcagtcg
gagatcggtgaggagctgggcatctcccagatgcatgtatcgcggctgctgtcgcgcacc
ctccgtcggctccgtaagggtctgatgatcgaggagtga
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