Streptomyces malaysiensis DSM 4137: SMALA_3178
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Entry
SMALA_3178 CDS
T05189
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Pathway
smal00300
Lysine biosynthesis
smal00470
D-Amino acid metabolism
smal01100
Metabolic pathways
smal01110
Biosynthesis of secondary metabolites
smal01120
Microbial metabolism in diverse environments
smal01230
Biosynthesis of amino acids
Module
smal_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SMALA_3178
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMALA_3178
Enzymes [BR:
smal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SMALA_3178
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
SAP25
Motif
Other DBs
NCBI-ProteinID:
ATL83412
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Position
4113405..4114760
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AA seq
451 aa
AA seq
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MTSTPLAMATRREQAVRAAVQQGLLGPDQPVVGLLDVAGIRAAAAGLRAAFEEVVAPGTP
VLHAFAVKAASLVPVLRLLADEGLGCEVASPGELALARAAGVTPDRIVLDSPAKTAAELR
EALGLGIAVNADNPQELDRLGALVGHRATPPAPLGLRINPQVGGGSIDALSTATATSKFG
VALQDPGAREWVVRAFTERPWLTRLHAHVGSQGCPLELMTAGIRVAYELAEEINEAVGRR
QIDALDIGGGLPVNFASDEVTPDYREYAQLLRNTVPGLLDGRYALVTEFGRSLLAKSGLV
LARVEYAKSAGGRPIAVTHAGAQLATRTVFAPDAWPLRVAAYDAEGRPKAAGPDGPIAQD
IAGPCCFAGDLIARDRPLPELAPGDLVALLDTGAYYFSNHFAYNSLPRPGVYGFDATEGE
VRFATVRPPQTVGEIVAESGAAYALGLTRLR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgacaccgctcgcgatggccacccggcgtgaacaggccgtacgggccgccgtg
cagcaggggctgctcggcccggaccagcctgtcgtcgggctgctggacgtggccgggatc
cgcgcggccgccgccggactgcgcgcggccttcgaggaggtcgtcgcgcccggcaccccc
gtcctgcacgccttcgcggtcaaggcggcctcgctcgtccccgtcctgcggctgctggcc
gacgagggcctgggctgcgaggtggcaagccccggagagctggcgctggcccgcgcggcc
ggggtgacgcccgaccggatcgtcctggactcccccgccaagaccgccgcggagctgcgc
gaggccctcggcctggggatcgcggtcaacgccgacaacccgcaggagctggaccggctc
ggcgcgctggtcgggcaccgcgcgaccccgcccgcgcccctgggcctgcggatcaaccca
caggtgggcggcggcagcatcgacgcgctcagcacggccaccgcgacctccaagttcggc
gtcgccctccaggacccgggggcgcgcgagtgggtcgtccgcgccttcacggagcgcccc
tggctgacccggctgcacgcgcatgtcggttcccagggctgtccgctggagctgatgacg
gcgggcatacgggtggcctacgaactggccgaagagatcaacgaggcggtcggccgccgg
cagatcgacgcgctcgacatcggcggcgggctccccgtgaacttcgcctccgacgaggtc
acccccgactaccgggagtacgcacagctgctgcggaacaccgtgccggggctcctcgac
gggcggtacgcgctggtcaccgagttcgggcggtccctgctcgccaagtccggtctggta
ctggcccgggtcgaatacgccaagtccgcgggcggccgccccatcgcggtcacccacgcg
ggcgcccagctcgccacgcgtacggtcttcgcccccgatgcctggccgctacgggtcgcg
gcctacgacgcggagggccgccccaaggcggcgggccccgacggcccgatcgcccaggac
atcgccggcccctgctgcttcgcgggcgacctgatcgcccgcgaccggcccctgccggag
ctggcaccgggcgatctggtcgccctgctggacacgggtgcgtactacttctccaaccac
ttcgcctacaacagcctgccccggccgggcgtctacggcttcgacgccaccgaaggcgag
gtgcgcttcgcgacggtgcggccgccgcagacggtgggggagatcgtggcggagagcggt
gccgcgtatgcgctggggctgacccgactgcggtag
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