Streptomyces malaysiensis DSM 4137: SMALA_3353
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Entry
SMALA_3353 CDS
T05189
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Pathway
smal03420
Nucleotide excision repair
smal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMALA_3353
03430 Mismatch repair
SMALA_3353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_3353
Enzymes [BR:
smal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMALA_3353
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMALA_3353
MMR (mismatch excision repair)
Other MMR factors
SMALA_3353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATL83587
LinkDB
All DBs
Position
complement(4321484..4323955)
Genome browser
AA seq
823 aa
AA seq
DB search
MSSLFDDSFLADLGPPSDEEQPPPPEDSAHPGHGGAEDVPHHLFSGGFDAPVPRESHYRD
GAARSVVDPSALLQGLNEQQRAAVEHTGSPLLIVAGAGSGKTRVLTHRIAYLLGARGTHP
GQILAITFTNKAAGEMKERVEELVGPRANAMWVSTFHSACVRILRRESKKLGFTSSFSIY
DAADSKRLMSLVCRDLDLDPKRFPPKSFSAKISNLKNELIDEETFAGQAADGFEKTLAEA
YVMYQARLREANALDFDDIIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLV
RELVGTGTDETPAAELCVVGDADQSIYAFRGATIRNILQFEEDYPSARTILLEQNYRSTQ
TILSAANAVIERNENRRPKNLWTDAGAGTEITGYVADTEHDEAQFVADEIDRLTDADDAR
AGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDAVP
LRRILNVPKRGIGERAEAMIDALALREKITFPQALRRVDEAYGMAARSANAVKRFNTLME
ELHTIVESGAGPATVLEAVLERTGYLAELQTSTDPQDETRIENLQELAAVALEFEQDRGE
NPGTLADFLEQVALVADSDQIPDEDTEGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPH
MRALGQTKELEEERRLAYVGITRARERLYLTRSTMRSAWGQPAYNPPSRFLEEIPDQYVR
WRRTGPATPSASMSGVASTPPSGLSSGLSSSRSRTGGSGFATRRASERPVVALAIGDRVT
HDSFGLGTVVAVKGSGDNAEATIDFGDEKPKRLLLRYAPVEKL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcgggcctccctcggacgaggag
cagcccccgccgcccgaggattcggcgcaccctggccacggcggtgccgaggatgtgccg
catcacctcttcagcggcggattcgacgcgcccgtgccccgggagtcccattaccgggac
ggcgcggcgcggtccgtggtggacccgtccgccctgctccaggggttgaacgagcagcag
agggccgccgtggagcacaccggctcgccactgctgatcgtcgcgggcgccggttcgggc
aagacccgggtgctcacccaccgcatcgcgtatctgctcggcgcccgcggcacacacccc
ggccagatcctcgccatcacctttaccaacaaggcggcgggcgagatgaaggagcgggtc
gaggagctcgtcggcccgcgggccaacgccatgtgggtgtccaccttccacagcgcctgc
gtccgcatcctgcgccgggagtcgaagaagctgggcttcacctcgtcgttctcgatctac
gacgccgccgactccaagcggctgatgtcgctggtctgccgggatctggacctcgacccc
aagcggttcccgccgaagtccttcagcgccaagatctccaacctcaagaacgagctgatc
gacgaggagaccttcgccggacaggcagcggacggctttgagaagaccttggccgaggcg
tatgtgatgtaccaggcgcggctgcgcgaggccaatgcgctggacttcgacgacatcatc
atgaccacggtcaatctgctccaggcgttcccggacgtcgcggagcactaccgccgccgc
ttccggcacgtcctggtggacgagtaccaggacaccaaccacgcgcagtacacactcgtg
cgcgagctggtgggcaccggcaccgacgagaccccggccgccgagctgtgcgtggtgggc
gacgccgaccagtcgatctacgccttccggggcgccacgatccgtaacatcctccagttc
gaggaggactaccccagcgcgcggacgatcctcctcgagcagaactaccgctccacccag
accattctgagcgcggccaacgcggtcatcgagcgcaatgagaaccgccgcccgaagaac
ctgtggacggatgccggcgccgggaccgagatcaccggctatgtggccgacaccgagcac
gacgaggcccagttcgtcgccgacgagatcgaccggctgaccgacgcggacgacgccagg
gccggggatgtggcggtcttctaccggaccaacgcccagtcccgtgtcttcgaagaggtc
ttcatccgggtcgggctgccgtacaaggtcgtcggcggggtgcgcttctacgagcgcaag
gaggtccgcgacgtcctcgcgtatctgcgggtgctggccaaccccgaggacgccgtcccg
ctgcgccggatcctgaacgtacccaagcgcggtatcggggagcgcgcggaggccatgatc
gacgcgctggccctgcgcgagaagatcaccttcccgcaggcgctgcgccgggtcgacgag
gcgtacggcatggcggcccgctcggccaacgccgtcaagcggttcaacacgctcatggag
gagctgcacaccatcgtggagtccggggcgggcccggcgaccgtcctggaggccgtgctg
gagcgcaccggctatctggccgagctccagacgtccaccgatccacaggacgagacccgg
atcgagaacctccaggagctcgcggccgtggccctggagttcgagcaggaccggggcgag
aaccccggcaccctcgcggacttcctggagcaggtcgcgctcgtcgctgactcggaccag
atcccggacgaggacaccgagggctccggcgtgatcacgctgatgacgctgcacacggcg
aagggcctggagttcccggtcgtcttcctcaccggtatggaggacggcgtcttcccgcat
atgcgggcgctcggccagaccaaggagctggaggaggagcgccggctggcctatgtgggg
atcacccgggcccgcgagcggctctatctgacccgctcgacgatgcgcagcgcatggggc
cagcccgcgtacaacccgccgtcccgcttcctggaggagatcccggaccagtatgtgcgg
tggcggcgcaccgggcccgccaccccgtcggcgtccatgagcggcgtcgcctcgactccg
ccgtcagggctgtcgtccggtctgtcgtcgtcgcgttcgcgcaccgggggcagcgggttc
gccacccggcgggccagtgagcgcccggtggtcgcgctggccatcggcgaccgggtcacc
catgactcgttcgggctcggcacggtggtggcggtgaagggcagcggggacaacgcggag
gcgacgatcgacttcggtgacgagaagcccaagcggctgctgctgcggtacgcaccggtg
gagaagctgtag
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integrated database retrieval system
