Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_3464
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Entry
SMALA_3464 CDS
T05189
Name
(GenBank) chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Pathway
smal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMALA_3464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smal03019
]
SMALA_3464
03110 Chaperones and folding catalysts [BR:
smal03110
]
SMALA_3464
03029 Mitochondrial biogenesis [BR:
smal03029
]
SMALA_3464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smal04147
]
SMALA_3464
Enzymes [BR:
smal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SMALA_3464
Messenger RNA biogenesis [BR:
smal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SMALA_3464
Chaperones and folding catalysts [BR:
smal03110
]
Heat shock proteins
HSP60 / Chaperonin
SMALA_3464
Mitochondrial biogenesis [BR:
smal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SMALA_3464
Exosome [BR:
smal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SMALA_3464
Exosomal proteins of other body fluids (saliva and urine)
SMALA_3464
Exosomal proteins of breast cancer cells
SMALA_3464
Exosomal proteins of colorectal cancer cells
SMALA_3464
Exosomal proteins of bladder cancer cells
SMALA_3464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
AIM3_BBC1_C
Motif
Other DBs
NCBI-ProteinID:
ATL83698
UniProt:
A0A291SS26
LinkDB
All DBs
Position
complement(4459958..4461583)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDAYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAQLLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISPYFATDMERMEASLDDPYILIVNSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGLDLLGRARKVTVTKDETTIVDGAGDTEQVQGRVNQIRAEIESSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQT
VSVFEKLELDGDEATGAQAVRLALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAPAGAPGGMPGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcacggcgcggcctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcaccctcggccccaagggccgtaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtatccatcgccaaggagatcgag
ctcgaggacgcgtacgagaagatcggtgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgcgaccgtcctcgcccaggcgctggtcaag
gagggcctccgcaacgtcgccgcgggcgccaacccgatggccctcaagcgcggcatcgag
aaggccgtcgaggccgtctccgcccagctgctcgagcaggccaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcgggctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccccg
tacttcgcgacggacatggagcgtatggaggcgtcgctcgacgacccgtacatcctgatc
gtcaactccaagatcagcagcgtgaaggacctcctcccgctgctcgagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcgaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgtaaggccatgctcggcgacatcgccatcctcaccggtggcaccgtcatctcc
gaggaggtcggcctcaagctggagaacgccggtctcgacctgctcggccgcgcccgtaag
gtcaccgtcaccaaggacgagaccaccatcgtggacggcgccggcgacaccgagcaggtg
cagggccgcgtcaaccagatccgcgccgagatcgagtcctcggactcggactacgaccgc
gagaagctccaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccagacc
gtctcggtcttcgagaagctggagctcgacggtgacgaggccaccggtgcccaggccgtg
cgcctggccctggaggccccgctgaagcagatcgcggtcaacgccggtctcgagggcggc
gtcgtggtcgagaaggtgcgcaacctgaccccgggtcacggcctcaacgccgcgaccggt
gagtacgtcgacctcatcgccgagggcatcatcgacccggccaaggtcacgcgctccgcg
ctccagaacgccgcgtcgatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccccggcgggcgctccgggcggcatgccgggcggtgacatggac
ttctga
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