Streptomyces malaysiensis: SMALA_3628
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Entry
SMALA_3628 CDS
T05189
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smal03021
]
SMALA_3628
Transcription machinery [BR:
smal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMALA_3628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
DUF7343
MarR_2
KORA
HTH_3
Sigma70_ECF
HTH_10
MarR
HTH_37
DUF1492
DUF6362
Motif
Other DBs
NCBI-ProteinID:
ATL83862
LinkDB
All DBs
Position
complement(4643404..4644180)
Genome browser
AA seq
258 aa
AA seq
DB search
MAPKDARALTKTFLDRLTELDEGTHEYQYVRNTLIELNLSLVRYAARRFHNRSVEMEDIV
QVGTIGLIKAIDRFDLSREVEFTTFAVPYIVGEIKRFFRDTSWAVHVPRRLQELRIDLAK
ANEELFQRLDRSPTTAELAEYLQLTEDEVIDGLVASNGYLTTSLDAPADQETGAARVTTY
ADRFGDVDPAMEAVENLHALKPLVEQLGERDRRILQMRFGEEMTQSEIGAELGVSQMHVS
RLLSRALGRLRRGMLTEE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcccaaggacgcgcgggcgctgaccaagacgttcctggaccggctgacggagctg
gacgaggggacgcacgaataccaatacgtgcggaacacccttatcgagctcaatctctcg
ctggtccggtacgccgcccggcggttccacaaccgctcggtggagatggaggacatcgtc
caggtcggcaccatagggctgatcaaggcgatcgaccggttcgacctgagccgcgaggtg
gagttcacgaccttcgcggttccctacatcgtcggtgagatcaagcggttcttccgggac
accagctgggcggtgcatgtgccccgccggctccaggagttgcggatcgatctcgccaag
gcgaacgaggagctgttccagcggctggaccgctcgcccaccacggccgagctcgcggag
taccttcagctgaccgaggacgaggtcatcgacgggctggtggccagcaacggctatctc
accacctcgctggacgcgcctgccgaccaggagaccggggccgcgcgcgtgaccacgtac
gcggaccggttcggcgacgtcgacccggccatggaggcggtggagaacctgcacgcgctc
aagccgctggtggagcagctcggtgagcgggaccgccgcattctccagatgcggttcggc
gaggagatgacgcagtcggagatcggcgccgagctcggcgtctcccagatgcatgtctcc
cggctgctcagccgtgcgctcggccggctgcggcgcggaatgctcaccgaggagtag
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integrated database retrieval system
