Streptomyces malaysiensis DSM 4137: SMALA_3712
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Entry
SMALA_3712 CDS
T05189
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Pathway
smal03030
DNA replication
smal03430
Mismatch repair
smal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMALA_3712
03430 Mismatch repair
SMALA_3712
03440 Homologous recombination
SMALA_3712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smal03032
]
SMALA_3712
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_3712
Enzymes [BR:
smal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMALA_3712
DNA replication proteins [BR:
smal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMALA_3712
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMALA_3712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_30
AAA_14
zf-CXXC
AAA_5
AAA_18
AAA_19
nSTAND3
Mg_chelatase
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ATL83945
LinkDB
All DBs
Position
complement(4740954..4743560)
Genome browser
AA seq
868 aa
AA seq
DB search
MSSLALYRRYRPETFAEVIGQEHVTGPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEKGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPASS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLGEVCGREAIPVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGASDDGVTYAMA
TSLLGYTDGSLLDSIVDAFAATDGAAAFEVVNRVIEGGNDPRRFVADLLERLRDLVILAA
VPDAAEKGLIDAPADVVERMQAQASVFGGAELSRAADLVNEGLTEMRGATSPRLQLELIC
ARVLLPAAFDDERSVQSRLERLERGALAGGLGGGGGAGVGGAAGGGVAGPAGPGPAMGYV
PGPDAHIPAAPPAVPAAGPSGPAAARAAMAGGGPGQGQAPGGPGGAEDPGGWPAGARPAA
DSGQGGGPGGAGDSGQQGGAPAAPAEGGGGQRPGAWPSGAQSPAAEGGGSRPGAWPTASA
PGSGASGAGGAPGAGGPGGASGGGGASGGGASGGGGGRGAGAPARQPGGWPTATAPGQGG
GPPAQPPAAPSAPTGPSAPAASAAPSAPAQGAPGMAQGAVQVRQMWPDILEAVKNRRRFT
WILLSQNATVAGFDGTTLQLGFSNAGARDSFVGGGSEDVLRQALQDAIGVQWRIEAIVDP
SGGAGQQGGGPGGPGGPGGFGGAGGPSGPGGYGGGGGSATGGGFGGGSGAGGGGFGGGGQ
PAAPRQPAPRPAPASPPPAAPSAPSGSADAGPPPEAAPAYREPEPPRVALEDDMPAEDDA
DLDDSALSGHDLIVRELGATVIEEIVNE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtccctcgcgctgtaccgccgctaccgccccgagaccttcgcggaggtcatcggg
caggagcatgtcaccggcccgttgcagcaggcgctgcgcaacaaccgggtcaaccacgcg
tatctgttcagcggtccccgcgggtgtggcaagacgaccagcgcgcgcatcctggcccgc
tgtctgaactgtgagaagggtcccaccccgacgccttgcggcgagtgccagtcgtgccag
gacctggcgcggaacggaccggggtcgatcgatgtgatcgagattgacgccgcgtcccac
ggtggtgtggatgacgcccgtgagctgagggagaaggcgttcttcgggcccgcgtcgagt
cgttacaagatctacatcatcgatgaggcccatatggtcacctcggcggggttcaacgcc
ctgctgaaggtggtcgaggagcccccggagcacctcaagttcatcttcgcgaccaccgag
ccggagaaggtcatcggcaccatccggtcgcgtacgcaccactatccgttccggctcgtg
cctcccgggacgctccgcgactatctgggagaggtctgcggacgcgaggcgatcccggtc
gaggacggggtgctgccgctggtcgtcagggccggggccgggtccgtgcgggattcgatg
tcggtgatggaccagttgctcgcgggtgcgagcgacgacggcgtgacctacgccatggcg
acctcgctgctcggctatacggacggctcgctgctcgactcgatcgtggacgccttcgcc
gcgaccgacggggcggcggcgttcgaggtcgtcaaccgcgtgatcgaggggggcaacgac
ccccggcgcttcgtcgccgatctgctggagcggctgcgcgatctggtgatcctcgccgcc
gtgccggacgcggcggagaaggggctcatcgacgcccccgccgatgtggtggagcggatg
caggcgcaggcgtcggtcttcggcggcgccgagctgagccgcgcggcggacctggtcaac
gagggcctgacggagatgcgcggcgccacctcgccgcggctccagctggagctgatctgc
gcccgggtgctgctgcccgccgccttcgacgacgagcgctcggtgcagtcgcgcctggag
aggctggagcgcggggcactcgcgggcggcctgggcggtggtggcggtgccggtgtcggc
ggcgctgccggtggtggcgtcgcggggccggctgggcccgggcccgccatggggtacgta
ccggggcccgacgcccacattcccgccgcgcctcccgccgttcccgccgccgggccgtcc
ggtccggccgccgcgcgtgcggcgatggccgggggcgggcccggccaggggcaggcccca
ggcgggccgggcggtgctgaggaccctggtgggtggcccgcgggtgcgcggcccgccgcg
gacagcggccagggcggcggtccgggtggcgccggtgacagtggacagcagggcggtgcc
cctgccgcgcccgctgagggcggcggcgggcagcggccaggggcctggccgtcgggcgct
cagtccccagcggcggagggcggcggctcgcggcccggagcctggcccacggcttccgcg
cccggttccggggcgtccggtgcgggcggtgcgcctggtgcgggcggtccgggcggcgct
tccggtggcggcggtgcctccggtggtggcgcttccggtggcggcggtggacggggcgcc
ggggcgcccgcccggcagcccggcggctggcccacggccaccgcgccggggcagggcggc
ggcccacccgcgcagccacccgcggcgccctccgcgccgaccgggccttccgcacccgcc
gcgtcggccgccccttccgcacccgcgcagggcgcaccgggcatggcgcagggcgccgtg
caggtgcggcagatgtggccggacatcctggaggcggtcaagaaccgccgccgcttcacc
tggatcctgctgagccagaacgcgacggttgccggcttcgacggcaccaccctccagctc
ggcttctccaacgcgggcgcgcgtgacagcttcgtgggcggcggcagcgaggacgtcctg
cggcaggcgctccaggacgccatcggcgtgcagtggcggatcgaggcgatcgtcgatccc
tcgggcggcgccggacagcagggcggcggcccaggtggtccaggtggtccaggtggcttc
ggcggtgccggtggcccgagcggtcccggcggctacggcggaggcggtggtagcgccacc
ggcggcggtttcggaggcggcagcggcgccggtggcggcggcttcggtggcggtggccag
cccgccgcgccccggcagcccgcgccccggcccgcgcccgcctccccgcccccggccgcg
ccctccgcaccgtccggatcggcggacgcgggcccgccccccgaggcggcgcccgcgtac
cgggagcccgagcctccgcgggtcgcgctggaggacgacatgccggccgaggacgacgcg
gacctggacgactccgcgctgagcggccacgacctgatcgtccgcgagctcggtgccacg
gtgatcgaagagatcgtcaacgagtag
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