Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_3765
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Entry
SMALA_3765 CDS
T05189
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smal03021
]
SMALA_3765
Transcription machinery [BR:
smal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMALA_3765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
HTH_24
MarR_2
NirdL-like_HTH
HTH_3
HTH_5
MarR
DUF7343
DUF134
HTH_Tnp_4
DUF4423
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ATL83998
LinkDB
All DBs
Position
4797191..4797922
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AA seq
243 aa
AA seq
DB search
MLFAELSDLTPGTPEHARVRAALIEANLPLVRYAAARFRSRNEPMEDVIQVGTIGLINAI
DRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNGATEDLTVLHGR
SPTTAEIAERLRLSEEEVLACIEAGRSYHATSLEAAQEGDGLPGLVDRLGYEDPALAGVE
HRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLSRSFARLRSANR
IES
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgctcttcgccgaactgtcggacctcacccccggaacccccgagcacgcccgcgtgcgc
gccgcgctcatcgaggccaatctgccgctggtccgctacgccgcggcccgcttccgcagc
cgcaacgagcccatggaggacgtgatccaggtcggcaccatcggcctgatcaacgccatc
gaccggttcgacccggaccgcggggtgcagttcccgaccttcgccatgccgaccgtcgtc
ggcgagatcaagcgctacttccgcgacaacgtccgcaccgtccatgtgccgcgccggttg
catgagctatgggtgcaggtcaacggcgcgaccgaggatctgaccgtgctgcacggccgc
tccccgacgacggccgagatcgccgaacggctcaggctcagcgaggaggaggtgctcgcc
tgcatcgaggcgggccgctcgtatcacgccacctccctggaggccgcccaggagggcgac
gggctgccgggactggtcgaccggctcggctacgaggacccggcgctcgccggagtcgag
caccgcgatctggtgcgccacctcctcgtacaactgcccgagcgcgaacagcgtatcctt
ttgcttcgttactacagcaatctgacgcaatctcagatcagtgccgagctcggtgtctcc
cagatgcatgtgtcccggctgctgtcccggagcttcgcccggctgagatccgcgaaccgg
atcgagtcctga
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