Streptomyces malaysiensis: SMALA_3766
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Entry
SMALA_3766 CDS
T05189
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smal03021
]
SMALA_3766
Transcription machinery [BR:
smal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMALA_3766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ATL83999
UniProt:
A0A291SSX9
LinkDB
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Position
4798110..4798940
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AA seq
276 aa
AA seq
DB search
MSVELGSSKVLNNDAPLMPDDCDAIDTRTLSRSLFLRLATLDKDSAEAGYVRDTLIELNL
PLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFR
DTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVTELAAALGVSEEDVVDGLAVGNAY
TASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLRFFA
NMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgctcaacaacgacgcaccgctcatgcctgac
gactgcgacgccatcgacacccgcaccctctcccgctccctcttcctgcggctcgccaca
ctcgacaaggacagtgcggaggccggctacgtccgtgacaccctcatcgagctgaacctc
ccgctcgtccgctacgcggcggcccggttccgcagccgtaacgagcccatggaggacatc
gtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaacggggc
gtggagttccccacgttcgccatgccgaccgtcgtgggcgagatcaagcggttcttccgc
gacaccagttggtcggtgcgggtcccgcggcggctccaggagctgcggctggcgctcacc
aaggccagtgacgagctgtcacagaagctcgaccgctccccgaccgtcacagagctcgcc
gcggcgctgggcgtctccgaggaggacgtggtcgacgggctcgcggtgggcaacgcctac
acggccagctcgctggactccccgtcgcccgaggacgacggcggcgaggggtcgctcgcc
gaccggctgggctacgaggacaccgcgctggagggcgtggagtaccgggagtcgctcaag
cccctgctggccaaactgccgccgcgcgagcgccagatcatcatgctgcgcttcttcgcc
aatatgacgcagtcgcaaatcggcgaagaggtcgggatctcccagatgcatgtctcccgg
ctgctcacccgcaccctggcccagctgcgcgagggtctgatctcggactga
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