Streptomyces malaysiensis: SMALA_3905
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Entry
SMALA_3905 CDS
T05189
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smal03032
]
SMALA_3905
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_3905
Enzymes [BR:
smal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SMALA_3905
DNA replication proteins [BR:
smal03032
]
Prokaryotic type
DNA Topoisomerases
SMALA_3905
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMALA_3905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ATL84138
LinkDB
All DBs
Position
4958200..4960824
Genome browser
AA seq
874 aa
AA seq
DB search
MADENTPNTPDDQTPDELAEGAALRVEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGLK
PVHRRVLYAMYDGGYRPEKGFYKCARVVGDVMGTYHPHGDSSIYDALVRLAQPWSMRMPL
VDSNGNFGSPGNDPAAAMRYTECKMAPLSMEMLRDIDEETVDFQDNYDGRNQEPTVLPAR
FPNLLINGSAGIAVGMATNIPPHNLREVAEGAQWALANPEATQEELLDALIDRIKGPDFP
TGALVVGRKGIEEAYRTGRGSITMRAVVEVEEIQGRQCLVVTELPYQVNPDNLAQKIADL
VKDGRIGGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQTNFGANMLALVD
GVPRTLSLDAFIRNWVTHQVEVIVRRTRFRLRKAEERAHILRGLLKALDAIDEVIALIRR
SDTVDTARGGLMGLLEIDEIQANAILEMQLRRLAALERQKIIQEHDELQAKISEYNAILA
SPERQRQIISEELTAIVEKYGDDRRSKLVPFDGDMSIEDLIAEEDIVVTITRGGYVKRTK
TEDYRSQKRGGKGVRGTKLKQDDIVSHFFVSTTHHWLLFFTNKGRVYRAKAYELPDTGRD
ARGQHVANLLAFQPDEKIARILAIRDYEAVPYLVLATKSGLVKKTPLKDYDSPRSGGVIA
INLREMEDSREDELIGAELVSSEDDLLLISKKAQSIRFTATDDSLRPMGRATSGVKGMSF
REDDELLSMNVVRPGTFVFTATDGGYAKRSNVDEYRVQGRGGLGIKAAKIVEDRGSLVGA
LVVEETDEILAITLSGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIARNAEAGREA
EEVEEESSSGNVAAEEAASEAAEGTAPPADETEE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaacaccccgaacacgcccgacgaccagacccccgacgagctcgccgaa
ggcgccgccctccgcgtcgagccggtcggcctcgagacggagatgcagcgctcgtacctc
gattacgcgatgagcgtgatcgtcagccgtgcgctgcccgacgtccgggacggcctcaag
ccggtgcaccgccgggtgctgtacgcgatgtacgacggcgggtaccgccccgagaagggc
ttctacaagtgcgcccgcgtcgtcggcgacgtcatgggcacctaccatccgcacggtgac
tcgtcgatctacgacgcgctggtgcggctggcccagccgtggtccatgcggatgccgctg
gtcgactccaacggcaacttcggctccccgggcaacgaccccgcggcggccatgcggtac
accgagtgcaagatggcgccgctgtcgatggagatgctccgggacatcgacgaggagacc
gtcgacttccaggacaactacgacggccgtaaccaggagccgacggtcctgccggcccgc
ttccccaacctgctgatcaatggctcggcggggatcgcggtcggcatggccaccaacatc
ccgccgcacaatctgcgcgaggtggccgagggcgcccagtgggccctggccaaccccgag
gccacgcaggaggagctgctcgacgccctgatcgaccggatcaagggcccggacttcccg
accggggcgctggtcgtcggccgtaagggcatcgaggaggcgtaccgcaccgggcgcggc
tcgatcaccatgcgcgcggtggtggaggtcgaggagatccagggccggcagtgcctggtg
gtcaccgagctgccgtaccaggtgaacccggacaacctcgcgcagaagatcgccgacctg
gtgaaggacggcaggatcggcggcatcgccgacgtccgcgacgagacctcctcgcgcacc
ggccagcgcctggtcatcgtgctcaagcgggacgcggtcgccaaggtcgtgctcaacaac
ctctacaagcacacggatcttcagaccaacttcggcgccaacatgctggcgctggtcgac
ggtgtgccgcgcaccctctcgctggacgcgttcatccgcaactgggtcacgcaccaggtc
gaggtcatcgtccgccggacgcgtttccggctgcgcaaggccgaggagcgggcgcatatc
ctgcgcggtctgctcaaggccctggacgcgatcgacgaggtcatcgcgctgatccggcgc
agcgacacggtcgacaccgcgcgcggcggcctgatggggctgctggagatcgacgagatc
caggccaacgcgatcctggagatgcagctgcggcggctggccgccctggagcgtcagaag
atcattcaggagcacgacgagctccaggcgaagatcagcgagtacaacgcgatcctcgcc
tcgccggagcggcagcggcagatcatcagcgaggagctgaccgcgatcgtcgagaagtac
ggcgacgaccggcgctccaagctggtccccttcgacggtgacatgtccatcgaggacctg
atcgccgaggaggacatcgtcgtcacgatcacgcgtggcggctatgtcaagcgcaccaag
accgaggactaccgctcgcagaagcgcggcggcaagggcgtgcgcgggacgaagctgaag
caggacgacatcgtctcccacttcttcgtctcgaccacccaccactggctgctgttcttc
accaacaagggccgggtctaccgggcgaaggcgtacgagctcccggacaccggacgcgac
gcgcgcggccagcatgtggcgaatctgctggccttccagcccgatgagaagatcgcgcgg
attctcgccatccgggactacgaggcggtgccgtatctggtgctggccaccaagtccggg
ctggtgaagaagaccccgctgaaggactacgactcgccccgctccggcggtgtgatcgcg
atcaacctccgggagatggaggacagccgcgaggacgagctgatcggtgccgagctggtc
tcctccgaggacgatctgctgctgatcagcaagaaggcgcagtcgatccggttcacggcg
acggacgattcgctgcggccgatggggcgcgcgacctccggtgtgaagggcatgagcttc
cgcgaggatgacgaactcctctcgatgaatgtggtccggcccggtacgttcgtgttcacc
gccacggacggtgggtacgcgaagcggtccaatgtcgatgagtaccgcgtccaggggcgc
ggcggtctcgggatcaaggcagcgaagatcgttgaggaccgtggttccctggtcggggcg
ctggtggtcgaggagacggatgagatcctcgccatcacgctcagcggtggcgtgatccgt
acccgggtcaatgaggtcagggagacgggccgtgacaccatgggcgtccaactgatcaac
ctgggtaagcgcgatgccgtcgtgggcatcgcccggaacgccgaggccggtcgtgaggct
gaagaggtcgaggaggaatcctcgtccgggaacgtggcagccgaggaggccgcgtccgag
gcggccgagggcacagcgcccccggccgacgagaccgaggagtaa
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