Streptomyces malaysiensis: SMALA_4179
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Entry
SMALA_4179 CDS
T05189
Name
(GenBank) very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_4179
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SMALA_4179
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ATL84412
LinkDB
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Position
complement(5274717..5275238)
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AA seq
173 aa
AA seq
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MPPAEPLDRGTRAPRQPGRPSHLWPGRHNGHVPVTPSSPEVSARMSRQASQDTTPELAVR
RLLHASGHRYRLHRPVPGLPRRTIDIAFPGLKIAVFLDGCFWHGCPQHATHPKSNADWWR
QKLNRNMARDLETTECLATDGWTVLRFWEHEAPLDVADRVAATVADARRPRSS
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcctccggcagaacccctcgaccgtggcacacgggcgccccgtcaaccggggcgcccg
agccacctctggcctggccggcacaatggccatgtgcccgtcacaccgtcttcccccgag
gtctccgcccgcatgagccgtcaggccagccaggacaccacgccggagctggctgtgcgt
cgtctgcttcacgcaagcgggcaccgctaccgtctgcaccgtcctgtcccagggctcccc
cgccggaccatcgacatcgctttcccgggcctcaagatcgccgtcttcctcgacgggtgt
ttctggcacggctgcccccagcacgccacccacccgaagtcgaacgccgactggtggcgg
cagaaactgaatcgcaacatggcacgtgaccttgaaaccaccgagtgtctcgcgacagac
ggatggacggttcttcgcttctgggagcacgaagcaccgcttgatgtggcagatcgagtc
gctgccactgtcgcagatgcgagaagaccgcgcagctcatag
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