Streptomyces malaysiensis: SMALA_4476
Help
Entry
SMALA_4476 CDS
T05189
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smal
Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smal03016
]
SMALA_4476
Enzymes [BR:
smal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SMALA_4476
Transfer RNA biogenesis [BR:
smal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMALA_4476
Prokaryotic type
SMALA_4476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ATL84706
LinkDB
All DBs
Position
5595948..5596811
Genome browser
AA seq
287 aa
AA seq
DB search
MSDEAAPGFVRVRLDLAYDGQEFSGWAKQRERRTVQGELEGALRTVTRSSETFELTVAGR
TDAGVHARGQVAHVDLPEELWAEHRDKLLRRLAGRLPHDVRVWKVAEAPPGFNARFSAIW
RRYAYRVTDHPGGVDPLLRGHVLWHDWPLDVAAMNAASERLLGEHDFAAYCKKRDGATTI
RTLQRLEWVRGADGVITATVRADAFCHNMVRSLVGALLFVGDGHRPPDWPAKVLAAGVRD
SAVHVVRPHGLTLEEVGYPADGQLAARNRESRNKRSLPGATAISGCC
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgaggcggcgcccggtttcgtacgggtccggctggatctggcctacgacggc
caggagttctcgggctgggccaagcagcgcgagcggcgcaccgtacagggcgaactggag
ggcgcgctgcggacggtgacgcgctcttcggagaccttcgagctgaccgtcgcgggccgc
accgacgccggggtccacgcccggggccaggtggcgcatgtggatctgcccgaggagttg
tgggccgagcaccgggacaagctgctgcggcggctggccggacggctgccccatgacgta
cgggtctggaaggtcgccgaggccccgcccgggttcaacgcccgcttctccgcgatctgg
cggcgctacgcctaccgggtcaccgaccaccccggcggggtcgatccgctgctgcgcggc
catgtgctgtggcacgactggccgctggacgtggccgccatgaacgcggcctccgaacgg
ctcctgggcgagcacgacttcgccgcgtactgcaagaagcgcgacggagccaccaccatc
cgcaccctccagcggctggagtgggtgcgcggggcggacggtgtcatcacggcgacggtg
cgggcggacgccttctgccacaacatggtgcgctcgctggtgggcgccctgctcttcgtg
ggcgacggacaccgccccccggactggccggccaaggtgctcgccgcgggagtgcgcgac
tccgccgtccatgtggtccggccccatggcctgaccctggaggaggtcggctatccggcc
gacggccaactcgccgcccgtaaccgggagtcccgcaacaagcgctccctgccgggcgcg
acggcgatttccggctgctgctga
DBGET
integrated database retrieval system
