Streptomyces malaysiensis: SMALA_4605
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Entry
SMALA_4605 CDS
T05189
Name
(GenBank) putative Ku70/Ku80 protein
KO
K10979
DNA end-binding protein Ku
Organism
smal
Streptomyces malaysiensis
Pathway
smal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SMALA_4605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_4605
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SMALA_4605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
ATL84835
LinkDB
All DBs
Position
complement(5755272..5756423)
Genome browser
AA seq
383 aa
AA seq
DB search
MRSIWNGNISFGLVSIPIKMYPATEDHSISFRQIHTRDGGRIRYRKVCELEDKPIESGEI
GRAYEDADGALVPITDEDLAALPLPTTHTLEIEAFISASEIDPLQLGDAYYLGTSGAAGA
KPYTLLREALKRSGKVAIAKYAHRGRERLGMLRVVGDTIALHRLLWPDEVREPAGVAPKE
KVTVKPAELDLADTLMETLGEVDISELHDDYHEALEELVAAKMSGATPAAEPGERPSGAQ
VVDLMAALKESVRSARQSRGEEGAGEAGEAAAAGEAGDASEGGAEEEAEATVHELRGRKK
APAKKAAAAKKAPAAVAEKKTAGARRGGTKAAKAAEKAAEKEPAEKGAAKAAAKRAGAKK
AAAKKSAAKKATAKKQAGKRTAS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctatctggaatgggaacatttccttcggcctggtgagcattccgatcaagatg
tatccggccaccgaggaccactcgatctcgttccggcagatccacacccgcgacggcggc
cgcatccgctaccgcaaggtctgcgagctcgaggacaagccgatcgagtcgggcgagatc
gggcgggcgtacgaggacgcggacggagcgctggtcccgatcaccgacgaggacctcgcg
gcccttccgctgcccaccacccacaccctggagatcgaggcgttcatctccgcctccgag
atcgatccgctccagctgggcgacgcctactacctgggcaccagcggcgccgccggggcc
aagccgtacaccctgctgcgtgaggcgctcaagcgcagcgggaaggtcgccatcgccaaa
tacgcccaccggggccgcgagcggctggggatgctccgcgtcgtgggcgacaccatcgcg
ctgcaccggctgctctggccggacgaggtgcgcgagcccgcgggggtggcgcccaaggag
aaggtgaccgtgaaaccggccgaactggacctcgccgacaccctgatggaaacgctcgga
gaggtggacatcagcgaactgcacgacgactaccacgaggcgctggaggagctggtggcg
gcgaagatgtccggcgccacgcccgcggccgaacccggtgagcggccctcgggcgcgcag
gtggtcgacctgatggcggccctgaaggagagcgtccgcagcgccaggcagtcccggggc
gaggagggagctggggaggccggggaagccgcggcggcgggggaggccggtgacgcctcg
gagggcggagccgaggaggaggcggaggctacggtccacgagttgcgcggccgtaagaag
gccccggcgaagaaggccgcggcggcgaagaaggcgcccgcggccgtggccgagaagaag
accgcgggggcgaggagaggcgggacgaaggccgccaaggcggcggagaaggctgcggag
aaggagcctgcggagaagggcgccgcgaaggccgccgcgaagagggcgggtgcgaagaag
gctgcggccaagaagagtgcggccaagaaggccaccgcgaagaagcaggcgggcaagcgg
accgcctcctga
DBGET
integrated database retrieval system
