Streptomyces malaysiensis: SMALA_5137
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Entry
SMALA_5137 CDS
T05189
Name
(GenBank) ATP-dependent DNA helicase
Organism
smal
Streptomyces malaysiensis
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DUF2800
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATL85367
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Position
6332302..6335430
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AA seq
1042 aa
AA seq
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MLAGPGTGKTTTLVEAVARRVREGADPERLLVLTFSRKAAVELRDRMAARLGGASAPRAT
TFHSYCYALVRAHQDVDLFADPLRLLSGPEQDVVVRELLAGQAELASEGRTFVRWPDDLR
ACLTTRGFADEVRAVLARSRELGLGPRSLGEFARRTGRPDWAAAAGFLAEYLDVLDAQGV
LDYAELVHRAVLLAGRPEVAAELAGRYDAVFVDEYQDTDVAQARLLRAVAGGGRTLLAFG
DPDQSIYAFRGADVGGILRFREDFPRADGRPAGVEVLTVSRRSGAALLAATRRIAGRMPL
TRLPARAVRAHRELAAARDGGRVEAYTYPTAGAELDNVADILRRAHLEDGVPWREMAVLV
RAGGRSIPGVRRALTSAGVPVEVDGDDIPLRHEPAVAPLLTALRAAATAALPDSGGLSAV
LGVETALTLLASPLGGMDAADLRRLGRALREEERSAGRAVPRPSDVLLAEALAEPERLAV
HDPAYARGAQNLGRLLRTAREELARGGTAEQALWQLWDGTPWPGRLERTAQRGGTAGRNA
DRDLDAVCALFETAARAEERTGGRGALNFLEEIDAQDIAADTLSRRMVRPDAVRLMTAHR
SKGLEWALVVVAGVQEGLWPDLRRRGSLLEADRIGRDGLAEPLPPGALLAEERRLFYVAA
TRAKERLVVTAVKAASEDGDQPSRFLTELGVPPTDVTQRPRRPLSVAALVAELRATTVDP
DASEALRDAAARRLARLAALRDEEGRPLVPAAHPYRWWGLYEPTHSEAPLRDRDRPVALS
GSALDQLVNTCSLQWFLGREVKADAPSTAAQGFGNVVHVLADEVASGRTPADLAVLMERL
DSVWDALAFDAPWKSRQEKEQARAALERFLHWHVMERGGRTPVATEHPFDVTLEADAYKV
RIRGSMDRVETDDDGRAYVVDFKTGKQAVTRGDVEHHPQLAVYQLAVREGAVDDLFDGGR
PEPGGAELVQLRQGAAKKDGGDDVPKVQAQEPPDGEWVGQLLATAAGRVLEERFTPSTGD
HCERCAFRGACSARAEGRHVVD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccgggcccggtacgggcaagacgacgacgctcgtggaggcggtggcccgcagg
gtgcgcgagggcgcggaccccgagcggctcctggtgctcaccttcagccgtaaggcggcc
gtcgaactgcgcgaccgcatggccgcgcgcctgggcggcgcgagcgccccgcgggccacg
acgttccactcctactgctacgccctggtccgcgcccaccaggacgtcgatctgttcgcc
gatccgctgcggctgctctccggaccggagcaggacgtcgtcgtcagggagctgctcgcc
ggtcaggcagagctggcgagcgagggccgtacgttcgtccgctggcccgacgatctgcgc
gcctgcctgaccacccggggcttcgccgacgaggtgcgcgcggtgctcgcccgcagccgg
gagctgggcctgggcccacggtcgctgggggagttcgcccggcgcaccgggcgccccgac
tgggccgccgcggccggcttcctcgccgagtacctggacgtcctggatgcccagggggtg
ctggactacgcggagctggtgcaccgcgcggtgctgctcgccgggcggccggaggtcgcg
gccgagctggcggggcggtacgacgccgtcttcgtcgacgagtaccaggacaccgacgtg
gcccaggcccggctgctgcgggcggtcgcgggcggcggcaggaccctgctcgccttcggc
gaccccgatcagtccatctacgccttccgcggcgccgacgtgggcggcatcctccgcttc
cgcgaggacttcccgcgggcggacggccggcctgccggcgttgaggtgctcaccgtctcc
cgccgctcgggggccgccctgctcgcggccacccggcggatcgccggccggatgccgctc
acccggctgcccgcgcgagccgtaagggcgcatcgggagctggcggccgcccgcgacggc
ggccgcgtcgaggcgtacacataccccaccgcgggcgccgagctggacaatgtggccgac
atcctgcgccgcgcccatctggaggacggggtgccttggcgcgagatggctgtcctggtg
cgcgccggggggcgctcgatcccgggtgtgcgccgggcgctcacctcggccggagtcccc
gtcgaggtggacggcgatgacatcccgctgcgccatgaacccgccgtggcccccctgctg
acggcgctgcgggccgccgccacggccgcgctgccggacagcggcgggctgtccgcggtc
ctcggcgtcgagaccgccctgaccctgctcgcctcgcccctcggcggtatggacgccgcc
gacctgcgccgcctgggccgcgcgctgcgcgaggaggagcggtccgcgggacgtgcggtg
ccgcgcccctccgacgtcctgctcgccgaggcgctcgccgagcccgagcggctggccgtc
cacgacccggcgtacgcacgcggcgcccagaacctcgggcggctgctgcgcacggcccgg
gaggagctggcccggggcggcaccgcggaacaggcgctgtggcagctgtgggacggcacc
ccctggcccggccgtctggagcggaccgcccagcgcggcggcaccgcagggcgcaacgcg
gaccgtgacctggacgcggtgtgcgcgctgttcgagaccgccgcccgcgcggaggagcgc
accggcggccgtggcgccctcaacttcctggaggagatcgacgcccaggacatagcggcc
gacaccctctcccgccggatggtccgccccgacgccgtacggctgatgaccgcccaccgc
tccaaggggctcgaatgggcgctggtggtcgtcgcgggggtgcaggaggggctgtggccc
gatctgcggcggcgcggctcgctcctggaggccgaccggatcggccgggacgggctggcc
gagccgctgccgccgggcgcgctgctggccgaggagcggcggctgttctatgtggcggcg
acgcgcgccaaggagcggctcgtggtcaccgccgtcaaggccgcctcggaggacggggac
cagccctcccgcttcctcaccgaactgggcgtcccgcccaccgatgtcacccagcgcccg
cgccgcccgctgtccgtcgccgcgctcgtcgccgagttgcgcgccaccaccgtcgacccg
gacgcctcggaggcgctgcgcgacgccgccgcgcggcggctggcccggctcgcggcgctg
cgcgacgaggagggccgcccactggttccggccgcccacccctaccgctggtgggggctg
tacgagccgacgcacagcgaggccccgctgcgcgaccgggaccggcccgtggcgctgtcc
ggcagcgcgctcgaccagctcgtcaacacctgctcgctccagtggttcctgggacgcgag
gtgaaggcggacgcgccctcgacggccgcccagggcttcggcaacgtggtgcacgtcctg
gccgacgaggtcgcctccggccgcaccccggccgatctcgccgtcctcatggagcgcctg
gactccgtatgggacgcgctcgctttcgatgccccctggaagtcacggcaggagaaggag
caggcacgggcggccctggagcgctttctgcactggcatgtgatggagcgcggcggccgc
accccggtcgccaccgagcaccccttcgacgtcacgctcgaagccgacgcctataaggtg
cgcatccgcggcagtatggaccgcgtcgagacggatgacgacgggcgcgcctacgtggtc
gacttcaagaccggcaaacaggccgtgacccgcggcgatgtcgagcaccacccccagctg
gcggtctatcagctggcggtgcgcgagggcgccgtggacgacctgttcgacggcgggcgc
ccagagccgggcggcgcggagctcgtccagctgcggcagggcgccgccaagaaggacggc
ggcgacgacgtccccaaggtccaggcccaggagccgccggacggggagtgggtggggcag
ctgctcgccaccgcggccgggcgcgtcctggaggagcggttcaccccgagcacgggcgac
cactgcgagcgctgcgccttccgcggcgcgtgcagcgcccgcgcggaggggcgccatgtg
gtcgactga
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