Streptomyces malaysiensis DSM 4137: SMALA_5142
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Entry
SMALA_5142 CDS
T05189
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smal
Streptomyces malaysiensis DSM 4137
Pathway
smal03420
Nucleotide excision repair
smal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMALA_5142
03430 Mismatch repair
SMALA_5142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smal03400
]
SMALA_5142
Enzymes [BR:
smal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMALA_5142
DNA repair and recombination proteins [BR:
smal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMALA_5142
MMR (mismatch excision repair)
Other MMR factors
SMALA_5142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Babuvirus_MP
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
ATL85372
LinkDB
All DBs
Position
6342268..6344523
Genome browser
AA seq
751 aa
AA seq
DB search
MTAATSSTLFPQGSTPGGYEATPRDADAVLDGLDPEQREVATSLHGAVCVLAGAGTGKTR
AITHRIAYGVRAGILQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQY
FWPKAVGGEVPRLVERKVQLVAEAAARCRVRLDRNELRDVTGEIEWSKVTQTVPEDYPAL
AAKSGREAPRDTAEIGRIYATYEQLKRDRGVIDFEDVLLLTVGVLQERPDIADQVRRQYQ
HFVVDEYQDVSPLQQRLLELWLGDRDSLCVVGDASQTIYSFTGATPDHLLNFRTRHPGAT
MVKLIRDYRSTPQVVHLANGLLSQARGRAAEHRLELVSQREAGPDPAYAAYQDEPAEAEG
TARRIRELITPVEQGGGGVPASQIAVLYRVNAQSELYEQALADAQVPYQLRGAERFFERP
EVREAGLLLRGAARGGSADPALADVDIPSQVRAVLGTRGWTPEPPAGSGAVRDRWESLAA
LVRLAEDFAASRPGATLSDLVAELDERAAAQHAPTVEGVTLASLHAAKGLEWDAVFLVGL
TEGMMPITYAKTEQQIEEERRLLYVGVTRARRHLTLSWALSRAPGGRASRRPTRFLNGLR
PGSQAMGAARTPGGSGGIERGAAAPGGGGAVRRRRGPVHCRVCGRALTDAGEMKLMRCEG
CPSELDEALYERLRDWRAEQAGLLGQPAYCVFTDKTLLAIAEAVPGTESELTRISGVGRR
KLDRFGADVLALCAGRELPSAVDGEGGVEAG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgtcctccactctgttcccgcagggctccacaccgggtggctacgag
gccacgccacgtgacgccgacgcggtgctcgacgggctcgaccccgagcagcgcgaggtg
gcgacgtccctgcacggcgcggtgtgcgtgctggccggggccggcaccggcaagacccgc
gccatcacccaccggatcgcctatggggtgcgcgcgggcatactccagccggccagtgtg
ctggcggtcaccttcaccaaccgggcggcgggggagatgcgcggccggctgcggcagctc
ggcgcgggcggggtgcaggcgcgcaccttccactcggcggccctgcggcagcttcagtac
ttctggcccaaggcggtcggcggggaggtgccgcggctggtcgagcgcaaggtgcagctc
gtggccgaggccgccgcgcgctgccgggtccggctggaccgcaatgagctgcgggacgtg
accggtgagatcgaatggtcgaaggtcacccagaccgtgcccgaggactatccggccctg
gccgccaagtccggccgggaggcgccccgcgacaccgccgagatcggccggatctacgcc
acctatgagcagctgaagcgcgaccgcggcgtcatcgacttcgaggatgtgctgctcctc
acggtcggtgtgctccaggagcggccggacatcgccgatcaggtgcgccgtcagtaccag
cacttcgtggtggacgagtaccaggacgtcagcccgctccagcagcggctgcttgagctg
tggctgggcgaccgggacagcctgtgcgtggtgggcgacgccagccagaccatctactcc
ttcaccggcgccacccccgaccatctgctcaacttccgcacccgccaccccggggccacg
atggtcaagctgatccgggactaccgctccaccccccaggtggtccacctggccaacggg
ctgctctcccaggcccgcggccgggccgccgagcaccggctggagctggtctcccagcgg
gaggcgggccccgacccggcctacgccgcctatcaggacgagccggccgaggccgagggc
accgcccggcggatccgtgagctgatcaccccggtcgagcaggggggcggcggcgtcccg
gcgagccagatcgcggtcctctaccgggtcaacgcccagtcggagctctatgagcaggcg
ctggccgatgcccaggtgccctatcagctgcgcggcgccgagcggttcttcgagcggccc
gaggtgcgcgaggcggggctgctgctgcgcggcgcggcccgcgggggaagcgccgatccg
gcgctggcggatgtcgatatcccgtcccaggtgcgggccgtgctgggcacccgaggctgg
acgcccgagcccccggcgggatcgggcgcggtgcgggaccgctgggagtccctggccgcc
ctggtgcggctcgcggaggacttcgcggcgagccgccccggggccacgctctccgatctg
gtggcggagctcgatgagcgggcggcggcacagcacgccccgaccgtggagggtgtgacc
ctcgcctcactccacgcggccaagggtctcgaatgggacgcagtcttcctggtcggtctc
accgaggggatgatgccgatcacctacgccaagacggagcagcagatcgaggaggagcgt
cggctgctctatgtgggggtcacccgtgcccgtcgccatctgacgctgtcctgggcgctc
tcgcgggctccgggaggccgggcctcccgccgccccacccgctttctcaacgggctgcgg
cccggctcccaggccatgggcgccgcccgcaccccgggcgggagcggtgggatcgagcgc
ggggcggcggccccgggcgggggcggcgcggtgcgcaggcggcgcggcccggtccactgc
cgggtgtgcggcagggcgctgaccgacgcgggcgagatgaagctgatgcgctgcgagggc
tgcccgtccgagctggacgaggcgctctatgagcggctgcgcgactggcgggccgagcag
gcggggctgctggggcagccggcctactgcgtgttcaccgacaagacattgctcgcgatc
gccgaggccgttccgggaaccgaatcggagctcacccgcatctccggtgtcggacggcgg
aagctggaccggttcggggccgatgttctcgcgctgtgcgcgggccgggaactcccctcg
gcagtcgatggcgagggcggcgtcgaagccgggtga
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