Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_5309
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Entry
SMALA_5309 CDS
T05189
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Pathway
smal00260
Glycine, serine and threonine metabolism
smal00460
Cyanoamino acid metabolism
smal00630
Glyoxylate and dicarboxylate metabolism
smal00670
One carbon pool by folate
smal00680
Methane metabolism
smal01100
Metabolic pathways
smal01110
Biosynthesis of secondary metabolites
smal01120
Microbial metabolism in diverse environments
smal01200
Carbon metabolism
smal01230
Biosynthesis of amino acids
smal01240
Biosynthesis of cofactors
smal04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SMALA_5309
09102 Energy metabolism
00680 Methane metabolism
SMALA_5309
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMALA_5309
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SMALA_5309
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SMALA_5309
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SMALA_5309
Enzymes [BR:
smal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SMALA_5309
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
DUF5768
Motif
Other DBs
NCBI-ProteinID:
ATL85539
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Position
6525240..6526529
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AA seq
429 aa
AA seq
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MAVTPWGPDFGALTRQDPELAGIILSEIDRVSGGLQLIAAENFASPAVLAALASPLANKY
AEGYPGARHHGGCEIVDIAERVAQDRAKALFGAEHANVQPHSGSSAVLAAYAALLRPGDT
VLAMALPHGGHLTHGSPANFSGRWFDFIGYGVDPATGLIDYEQLRELAHAHRPKAIVCGS
ISYPRHLDYAAFRAVADEVGAYLIADAAHSIGLVAGKAAPSPVPYADVVCATTHKVLRGP
RGGMLLCGAELAERVDRAVFPFTQGGAQMHSVAAKAVAFGEAAAPAYTAYARRVVANARM
LADALVAEGLAVTTGGTDTHMITADTAPLGLEGRTAKGRCAAAGIVLDTCALASATDPRG
CVKGLRLGTAAVTTQGMGAPEMERIAALMGTVLRDEGVVREKVAELAGRFPPYPDEGRIM
QPSEGVGRL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaccccctggggccccgatttcggagcgctcacccgccaggacccggagctg
gcggggatcatcctgagcgagatcgaccgcgtctccggcggccttcagctgatcgcggcc
gagaacttcgcctcgccggccgtactggcggccctggcctcgccgctggccaacaagtac
gccgaggggtatccaggcgcccgccatcacggcggctgcgagatcgtggacatcgccgag
cgggtggcccaggaccgggcgaaggcgctgttcggcgccgagcacgccaatgtgcagccg
cattcggggtcctcggcggtgctggccgcctacgccgcgctgctgcggcccggggacacg
gtgctggcgatggcgctgccgcacggcggccacctcacccatggctcacccgccaatttc
tccggccgctggttcgacttcatcgggtacggcgtcgatccggcgaccggtctgatcgac
tacgagcagctccgcgagctcgcccacgcccaccggccgaaggcgatcgtctgcggttcg
atctcctacccgcgccacctggactacgccgccttccgcgccgtggccgacgaggtgggc
gcgtatctcatcgccgacgccgcccattcgatcggtctggtcgcggggaaggcggcgccc
tctccggtgccgtacgcggatgtggtgtgcgcaacgacacacaaagtgctgcgcgggccg
cgcggcggaatgctgctgtgcggtgcggagctcgccgagcgggtcgaccgggcggtgttc
ccgttcacccagggcggcgcccagatgcactccgtcgcggccaaggcggtggccttcggc
gaggccgcggcgcccgcctacaccgcctatgcgcggcgggtggtggccaatgcccggatg
ctcgctgacgccctggtcgcggagggtctcgcggtgaccacgggcggcaccgacacccat
atgatcaccgccgacacggccccgctgggcctggaagggcgcaccgcgaaaggccgttgc
gcggccgccggaatcgtcctggacacctgcgccctggcgtccgccacggacccccgggga
tgcgtcaaggggctgcggctgggcaccgccgcggtgaccacccagggaatgggagctccg
gaaatggagcggatagccgccctcatgggaaccgtgttgcgggacgagggcgtggtacgg
gaaaaggtggcggaactggccgggagatttccgccctatccggacgagggtcgaatcatg
caaccatccgaaggtgtaggacgtctgtaa
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