Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_5629
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Entry
SMALA_5629 CDS
T05189
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smal03016
]
SMALA_5629
Enzymes [BR:
smal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMALA_5629
Transfer RNA biogenesis [BR:
smal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMALA_5629
Prokaryotic type
SMALA_5629
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ATL85859
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All DBs
Position
6907913..6908866
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AA seq
317 aa
AA seq
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MTRNGRAGSGAPDGLVIVDKPAGFTSHDVVAKMRRFARTRRVGHAGTLDPMATGVLVIGV
EKATRLLGHLALTEKEYRATIRLGQTTVTDDAEGEITASDGATGIDPAALRAGIEELTGD
IQQVPSKVSAIKIDGKRSYARAREGEEFTIPARPVTVSSFVLHDRREAKAEDGTTVLDLD
VTVVCSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGLDAARTLERLEESLEIMPIA
EAAAAAFPRWDVDAHQARLLGNGVRIDMPTGERAGEGTPGPGERPGPGPVAVFGPEGRFL
ALVEESKGKAKSLAVFV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaacggcagggccggttccggggcaccggacggcctggtgatcgtcgacaag
ccggcgggcttcacctcgcacgacgtcgtcgccaagatgcgccgcttcgctcgcacccga
cgggtcggccacgccggaacgctggacccgatggccaccggcgtgctcgtgatcggtgtg
gagaaggcgacccggctgctgggccatctggcgctgaccgagaaggagtaccgggccacc
atccggctcggccagaccacggtcaccgatgacgcggagggcgagatcaccgcctcggac
ggcgccaccgggatcgacccggccgccctccgggccgggatcgaggagctgaccggggac
atccagcaggtcccctcgaaggtcagcgccatcaagatcgacggcaagcgctcctacgct
cgggcgcgggagggcgaggagttcacgatcccggcgcggccggtgaccgtctcctccttc
gtcctccacgaccgccgcgaggccaaggcggaggacggcaccaccgtcctcgacctggac
gtcacggtggtgtgctcctccggcacctacatccgcgccctggcgcgcgacctgggcgcg
ggactcggcgtcggcggccatctcacggccctgcgcaggacccgggtcggcccgtacggg
ctggacgcggccaggacgctggagcggctggaggagtcgctggagatcatgcccatcgcc
gaggcggcggccgcagccttcccgcgctgggacgtggacgcccaccaggcccggctgctg
ggcaacggcgtgcggatcgacatgccgacgggggagcgggcgggggaggggacgccgggg
ccgggtgagcggcctggtccgggtccggtcgcggtcttcgggcccgaggggcgcttcctg
gcgctcgtggaggagtcgaagggcaaggcgaagagcctggccgtcttcgtatga
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