Streptomyces malaysiensis subsp. malaysiensis DSM 4137: SMALA_5676
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Entry
SMALA_5676 CDS
T05189
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
smal
Streptomyces malaysiensis subsp. malaysiensis DSM 4137
Brite
KEGG Orthology (KO) [BR:
smal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smal03009
]
SMALA_5676
Enzymes [BR:
smal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SMALA_5676
Ribosome biogenesis [BR:
smal03009
]
Prokaryotic type
ribosomal protein modification factors
SMALA_5676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
ATL85906
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Position
6985735..6987231
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AA seq
498 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDQGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISGRLQTIL
SGGIHASHTPRDRRKLLPISPAERQDAISVALPGHAQDTAPEDLPQGVAPASGPRAPLRR
RLDSSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVSE
NNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLIDVLTSTEKVAPYFD
LSFQHSAPGVLRAMRRFGDTDRFLELLETIRGKAPQAGARSNFIVGFPGETEEDLAELER
FLSEARLDAIGVFGYSDEDGTEAAGYENKVDPEVVAERLERVSRLAEELTAQRAEERLGE
VVEVLVEEIDETGAVLGRGAHQAPETDGQTLLGTDGEPEVGRMVEAKVIATEGVDLVAEP
LVPLERQGGGTSTGEADR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgcaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggacggctgggagctcgtcgaggaagccgcc
gacgccgacgtcgccgtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcg
gtcgacgccctgctggaggcgaacgatctgaaggaccagggccgcactcaggccgtggtg
gccgtcggctgcatggccgagcgatacggcaaggagctcgcggaggcgctgcccgaggcc
gacggggtgctcggcttcgacgactacgccgacatctccggccgcttgcagaccatcctc
tccggcggcatccacgcctcccacaccccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcggcaggacgccatctcggtggcgctgcccggccacgcccaggacaccgcg
cccgaggacctgccccaaggggtggccccggcctccgggccacgggccccgctgcgccgc
agactggacagcagcccggtcgcctcggtgaagctggcctccggctgcgaccggcggtgc
tcgttctgcgccatcccgtccttccgcggctccttcatctcccgccgcccctccgatgtg
ctgggcgagacccgctggctggccgagcagggggtgaaggaggtcatgctggtctcggag
aacaacacctcgtacggcaaggacctcggggacatccggctgctggagacgctgctgccg
gagctggccgcggtggacggcatcgagcggatccgggtcagctatctccagcccgccgag
atgcgccccgggctgatcgacgtgctcacctcgaccgagaaggtcgcgccgtacttcgac
ctgtccttccagcactcggcgcccggggtgctgcgcgccatgcgccgcttcggcgacacc
gaccggttcctggagctgctcgagacgatcagaggcaaggcgccgcaggccggcgcccgg
tcgaacttcatcgtcggcttccccggtgagaccgaggaggacctggccgagctcgagcgc
ttcctcagcgaggcgcggctggacgcgatcggcgtcttcgggtactcggacgaggacggc
accgaagccgctggttacgagaacaaggtcgaccccgaggtggtcgcggagcgtctggag
cgcgtctcgcggctcgcggaggagctgaccgctcagcgggccgaggagcggctcggcgag
gtcgtcgaggtgctggtggaggagatcgacgagaccggggcggtcctcggccgcggcgcc
caccaggcgccggagaccgatggccagacgctgctcggcaccgacggggagccggaggtg
ggccgtatggtcgaagcgaaggtgatcgcgacggagggagtggacctcgtcgcggagccg
cttgtgccgctggaacgacagggcggcggcacgtccaccggggaggctgacagatga
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